Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.0e-89 333.6 187 100.0
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 3.4e-45 185.7 173 60.7
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 4.6e-34 148.7 167 55.1
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 1.7e-25 120.2 177 45.8
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 5.0e-25 118.6 166 45.8
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 4.0e-22 109.0 182 40.7
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 2.0e-21 106.7 154 48.1
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 2.9e-20 102.8 169 41.4
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 4.1e-19 99.0 167 46.7
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 5.4e-19 98.6 157 43.3
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 9.2e-19 97.8 163 41.7
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 9.2e-19 97.8 143 51.7
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 2.1e-18 96.7 165 43.0
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 2.1e-18 96.7 164 40.9
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 2.7e-18 96.3 160 39.4
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 6.0e-18 95.1 166 41.0
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 3.9e-17 92.4 178 44.4
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 3.9e-17 92.4 155 42.6
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 6.6e-17 91.7 163 41.7
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 1.1e-16 90.9 158 42.4
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 1.1e-16 90.9 172 45.3
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 1.1e-16 90.9 159 42.1
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 1.5e-16 90.5 160 40.0
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.9e-16 90.1 175 43.4
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 2.5e-16 89.7 161 46.0
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 2.5e-16 89.7 167 41.9
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 5.6e-16 88.6 152 44.1
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 5.6e-16 88.6 164 47.6
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.2e-15 87.4 158 41.1
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 1.6e-15 87.0 175 44.0
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 1.6e-15 87.0 178 38.8
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 1.6e-15 87.0 160 41.9
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 2.8e-15 86.3 160 42.5
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 3.6e-15 85.9 152 42.8
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 8.1e-15 84.7 152 42.1
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 8.1e-15 84.7 152 42.1
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 1.1e-14 84.3 166 39.2
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 1.4e-14 84.0 170 42.9
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.8e-14 83.6 152 43.4
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 2.3e-14 83.2 177 36.7
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 4.0e-14 82.4 180 43.3
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 4.0e-14 82.4 157 40.1
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 1.5e-13 80.5 190 34.7
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 1.5e-13 80.5 186 38.2
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 1.5e-13 80.5 186 38.2
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 1.5e-13 80.5 186 38.2
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 1.5e-13 80.5 193 34.2
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 2.6e-13 79.7 158 41.1
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 2.6e-13 79.7 167 36.5
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 3.4e-13 79.3 171 37.4
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 4.4e-13 79.0 185 37.8
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 4.4e-13 79.0 213 34.7
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 1.7e-12 77.0 185 37.3
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 1.7e-12 77.0 159 40.3
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 1.7e-12 77.0 182 37.9
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 1.7e-12 77.0 163 36.8
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 2.2e-12 76.6 159 39.0
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 3.7e-12 75.9 191 35.1
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 4.9e-12 75.5 188 35.1
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 6.4e-12 75.1 170 44.7
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 6.4e-12 75.1 167 34.7
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 8.4e-12 74.7 166 38.0
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 1.4e-11 73.9 162 36.4
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 1.9e-11 73.6 169 38.5
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 1.9e-11 73.6 173 41.6
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 1.9e-11 73.6 173 43.9
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 2.4e-11 73.2 177 36.7
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 2.4e-11 73.2 177 36.7
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 3.2e-11 72.8 163 37.4
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 3.2e-11 72.8 163 37.4
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 7.1e-11 71.6 192 32.8
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 9.2e-11 71.2 185 39.5
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 9.2e-11 71.2 183 33.9
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 9.2e-11 71.2 172 38.4
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 1.6e-10 70.5 167 39.5
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 2.7e-10 69.7 178 39.9
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 4.6e-10 68.9 174 36.2
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 4.6e-10 68.9 147 40.1
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 7.8e-10 68.2 171 36.8
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 1.3e-09 67.4 156 35.9
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 4.3e-08 62.4 158 32.9
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 5.6e-08 62.0 170 32.4
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 7.3e-08 61.6 162 37.0
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 2.8e-07 59.7 163 31.9
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 8.9e-06 54.7 156 31.4


User provided reference genes

Program Settings