Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 7.0e-209 730.3 356 100.0
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 5.4e-153 544.7 368 74.7
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 3.9e-151 538.5 368 73.6
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 4.5e-131 471.9 364 64.6
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.9e-130 469.2 365 64.7
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 8.4e-130 467.6 360 67.2
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.9e-129 466.5 370 64.3
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-127 459.9 360 62.8
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.0e-127 459.1 360 62.8
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 3.9e-127 458.8 362 64.6
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 5.1e-127 458.4 367 63.2
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 5.1e-127 458.4 367 63.2
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.6e-125 453.4 353 65.2
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 2.8e-125 452.6 356 63.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.1e-124 449.1 362 62.4
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.5e-123 446.8 356 64.3
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.5e-123 446.8 372 60.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.5e-123 446.8 372 60.2
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 3.4e-123 445.7 361 60.9
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.5e-123 445.3 366 62.3
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 4.5e-123 445.3 356 64.0
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 4.5e-123 445.3 356 64.0
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 4.5e-123 445.3 353 65.4
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.2e-120 437.2 363 63.9
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 2.1e-120 436.4 393 58.8
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 2.1e-120 436.4 359 59.6
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 4.6e-120 435.3 363 63.9
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.3e-119 433.7 363 62.0
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.8e-119 433.3 363 61.4
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 3.9e-119 432.2 355 63.7
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 3.9e-119 432.2 363 63.6
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 6.7e-119 431.4 362 61.3
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.9e-118 429.9 359 60.2
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.9e-118 429.9 365 60.0
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.5e-118 429.5 359 59.6
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.3e-118 429.1 348 61.5
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 5.7e-118 428.3 359 59.6
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 7.4e-118 427.9 364 60.7
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 7.4e-118 427.9 361 60.1
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.3e-117 427.2 349 61.3
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.6e-117 426.8 359 59.6
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 3.7e-117 425.6 364 60.2
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 4.8e-117 425.2 356 61.2
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 6.3e-117 424.9 352 60.5
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.8e-116 423.3 364 60.2
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.8e-116 423.3 364 58.8
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 3.1e-116 422.5 348 62.9
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 5.3e-116 421.8 358 58.4
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 5.3e-116 421.8 359 59.3
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.2e-115 420.6 366 59.0
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.2e-115 420.6 362 59.4
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 2.0e-115 419.9 352 60.2
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 2.0e-115 419.9 361 61.8
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 3.4e-115 419.1 363 58.7
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 5.9e-115 418.3 373 58.2
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.3e-114 417.2 364 59.1
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.3e-114 417.2 360 57.2
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.2e-114 416.4 374 60.2
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.9e-114 416.0 360 58.6
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 3.8e-114 415.6 351 61.0
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 6.5e-114 414.8 375 57.9
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.1e-113 414.1 354 59.3
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.4e-113 413.7 357 60.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 1.4e-113 413.7 357 62.5
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 9.4e-113 411.0 357 59.7
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.4e-113 411.0 360 58.3
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 1.2e-112 410.6 363 58.1
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.6e-112 410.2 357 59.7
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 2.1e-112 409.8 359 59.1
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 7.9e-112 407.9 354 58.5
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-111 406.4 356 57.0
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 2.3e-111 406.4 352 59.1
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 3.0e-111 406.0 353 58.6
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 5.1e-111 405.2 353 58.6
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 2.2e-109 399.8 363 57.6
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 4.8e-109 398.7 363 57.3
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 6.3e-109 398.3 381 55.1
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.8e-108 396.7 362 56.6
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 8.5e-106 387.9 350 57.1
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.5e-105 386.3 365 58.9
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 7.2e-105 384.8 341 58.7
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.6e-104 383.6 357 57.7
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.6e-104 383.6 358 56.4
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.4e-103 380.6 338 59.2
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 5.1e-103 378.6 338 58.3
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 6.7e-103 378.3 338 58.3
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.1e-102 377.5 333 57.7
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.7e-101 373.6 338 58.6
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 2.8e-101 372.9 333 58.0
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 6.7e-95 351.7 355 51.3
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 2.8e-93 346.3 343 53.6
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 6.3e-93 345.1 264 63.6
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 8.2e-93 344.7 248 66.1
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 8.2e-93 344.7 364 51.1
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 3.5e-91 339.3 374 53.2
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.2e-90 336.7 353 50.1
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 6.1e-88 328.6 348 51.7
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 4.2e-81 305.8 313 53.4
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 2.4e-76 290.0 297 51.5
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 3.8e-74 282.7 354 42.9
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.2e-70 271.2 164 75.0
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 2.5e-65 253.4 234 56.4
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 7.5e-62 241.9 377 37.7
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 2.7e-59 233.4 234 51.3
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 2.3e-58 230.3 221 52.9
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 2.2e-53 213.8 146 74.0
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.1e-52 211.5 222 50.5
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.3e-49 199.9 218 50.0
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 2.1e-48 197.2 244 46.7
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-47 194.1 218 48.6
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-47 193.7 119 75.6
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.3e-47 193.7 400 32.5
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.1e-47 193.4 218 48.2
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 5.2e-47 192.6 139 64.0
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 6.8e-47 192.2 208 48.6
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.7e-34 151.0 165 46.7
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.0e-31 138.7 212 40.1
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-24 117.5 64 84.4
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-22 110.5 64 78.1
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.0e-18 97.1 64 73.4
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 6.9e-15 85.9 120 42.5
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 4.5e-14 83.2 157 33.1
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 8.4e-13 79.0 52 69.2
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 4.2e-12 76.6 53 69.8
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 4.2e-12 76.6 53 69.8
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 4.2e-12 76.6 53 69.8
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 7.1e-12 75.9 55 67.3
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 2.1e-11 74.3 51 68.6
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 1.4e-07 61.6 49 63.3
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 1.4e-07 61.6 49 63.3
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 1.4e-07 61.6 49 63.3
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 1.4e-07 61.6 49 63.3


User provided reference genes

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