Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G145500 Manihot esculenta HOM05D008370 ORTHO05D009732 2.0e-62 242.3 123 100.0
Manes.13G080360 Manihot esculenta HOM05D008370 ORTHO05D009732 9.7e-25 117.1 81 74.1
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 1.8e-10 69.7 81 51.9
Sabra07G0065300 Salix brachista HOM05D008370 ORTHO05D009732 3.0e-10 68.9 81 50.6
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 6.7e-10 67.8 76 50.0
COL.COLO4_22370 Corchorus olitorius HOM05D008370 ORTHO05D009732 6.7e-10 67.8 84 50.0
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 6.7e-10 67.8 82 56.1
Thecc.01G117100 Theobroma cacao HOM05D008370 ORTHO05D009732 1.1e-09 67.0 83 45.8
MD15G1335300 Malus domestica HOM05D015647 ORTHO05D009732 2.0e-09 66.2 90 43.3
Potri.007G077300 Populus trichocarpa HOM05D008370 ORTHO05D009732 2.6e-09 65.9 82 52.4
Sabra05G0071700 Salix brachista HOM05D008370 ORTHO05D009732 2.6e-09 65.9 82 54.9
Gorai.003G048600 Gossypium raimondii HOM05D008370 ORTHO05D009732 7.4e-09 64.3 81 45.7
Gohir.D03G047500 Gossypium hirsutum HOM05D008370 ORTHO05D009732 1.3e-08 63.5 81 45.7
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 1.3e-08 63.5 81 45.7
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 1.7e-08 63.2 76 51.3
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 1.7e-08 63.2 76 51.3
MD01G1015700 Malus domestica HOM05D008370 ORTHO05D009732 2.2e-08 62.8 81 43.2
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 2.8e-08 62.4 82 48.8
Gohir.A02G136703 Gossypium hirsutum HOM05D008370 ORTHO05D009732 4.8e-08 61.6 85 45.9
Actinidia01380 Actinidia chinensis HOM05D008370 ORTHO05D009732 1.8e-07 59.7 81 48.1
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 1.8e-07 59.7 85 43.5
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 2.4e-07 59.3 84 38.1
Gohir.A01G042000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 3.1e-07 58.9 81 40.7
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 4.1e-07 58.5 82 45.1
Gorai.002G039200 Gossypium raimondii HOM05D008370 ORTHO05D009732 4.1e-07 58.5 81 40.7
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 4.1e-07 58.5 83 44.6
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 5.3e-07 58.2 78 47.4
Lj4g0014601 Lotus japonicus HOM05D010746 ORTHO05D009732 5.3e-07 58.2 79 44.3
Duzib147G0345 Durio zibethinus HOM05D008370 ORTHO05D009732 7.0e-07 57.8 83 42.2
Lalb_Chr12g0203401 Lupinus albus HOM05D010746 ORTHO05D009732 7.0e-07 57.8 82 41.5
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 9.1e-07 57.4 82 46.3
QL06p031379 Quercus lobata HOM05D008370 ORTHO05D009732 1.2e-06 57.0 75 45.3
Actinidia12221 Actinidia chinensis HOM05D008370 ORTHO05D009732 1.5e-06 56.6 82 45.1
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 2.0e-06 56.2 81 42.0
Lalb_Chr12g0203411 Lupinus albus HOM05D008370 ORTHO05D009732 3.4e-06 55.5 76 47.4
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 3.4e-06 55.5 81 42.0
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 4.5e-06 55.1 81 39.5
Phvul.009G138200 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 4.5e-06 55.1 81 44.4
Atru.chr4.716 Acer truncatum HOM05D008370 ORTHO05D009732 5.9e-06 54.7 89 42.7
CiPaw.03G131600 Carya illinoinensis HOM05D008370 ORTHO05D009732 5.9e-06 54.7 77 49.4
Eucgr.I00294 Eucalyptus grandis HOM05D008370 ORTHO05D009732 5.9e-06 54.7 80 43.8
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 7.7e-06 54.3 81 44.4
TPR.G2226 Trifolium pratense HOM05D008370 ORTHO05D009732 7.7e-06 54.3 85 43.5


User provided reference genes

Program Settings