Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G139700 Manihot esculenta HOM05D007801 ORTHO05D009763 1.2e-36 156.0 81 100.0
Manes.13G088400 Manihot esculenta HOM05D007801 ORTHO05D009763 2.3e-19 98.6 81 63.0
Manes.13G088201 Manihot esculenta HOM05D007801 ORTHO05D009763 3.1e-19 98.2 84 60.7
COL.COLO4_11043 Corchorus olitorius HOM05D007801 ORTHO05D009763 2.7e-15 85.1 81 56.8
Potri.007G086000 Populus trichocarpa HOM05D007801 ORTHO05D009763 1.0e-14 83.2 84 58.3
Prupe.6G177500 Prunus persica HOM05D007801 ORTHO05D009763 1.3e-14 82.8 84 53.6
Duzib264G0602 Durio zibethinus HOM05D007801 ORTHO05D009763 6.6e-14 80.5 81 58.0
Thecc.01G109200 Theobroma cacao HOM05D007801 ORTHO05D009763 6.6e-14 80.5 81 58.0
QL06p033111 Quercus lobata HOM05D007801 ORTHO05D009763 1.5e-13 79.3 81 53.1
Dinv21964 Davidia involucrata HOM05D007801 ORTHO05D009763 1.9e-13 79.0 78 57.7
Rhsim10G0155300 Rhododendron simsii HOM05D007801 ORTHO05D009763 4.3e-13 77.8 83 51.8
Rhsim10G0155500 Rhododendron simsii HOM05D007801 ORTHO05D009763 9.5e-13 76.6 83 51.8
TWI77G0824 Tripterygium wilfordii HOM05D007801 ORTHO05D009763 1.6e-12 75.9 88 54.5
TAR280G0007 Trochodendron aralioides HOM05D007801 ORTHO05D009763 8.1e-12 73.6 85 52.9
FAN28G2811 Fragaria x ananassa HOM05D007801 ORTHO05D009763 2.3e-11 72.0 83 53.0
Rhsim10G0155200 Rhododendron simsii HOM05D007801 ORTHO05D009763 2.3e-11 72.0 82 50.0
FAN23G2938 Fragaria x ananassa HOM05D007801 ORTHO05D009763 3.1e-11 71.6 83 53.0
Glyma.18G020600 Glycine max HOM05D007801 ORTHO05D009763 4.0e-11 71.2 81 48.1
Potri.005G081400 Populus trichocarpa HOM05D007801 ORTHO05D009763 4.0e-11 71.2 81 50.6
Sabra05G0066600 Salix brachista HOM05D007801 ORTHO05D009763 4.0e-11 71.2 82 51.2
ClCG01G019080 Citrullus lanatus HOM05D023936 ORTHO05D009763 5.2e-11 70.9 84 51.2
Gohir.D03G044800 Gossypium hirsutum HOM05D007801 ORTHO05D009763 6.8e-11 70.5 81 48.1
Gorai.003G045900 Gossypium raimondii HOM05D007801 ORTHO05D009763 6.8e-11 70.5 81 48.1
CiPaw.03G137300 Carya illinoinensis HOM05D007801 ORTHO05D009763 8.9e-11 70.1 82 48.8
Haze_25007 Corylus avellana HOM05D007801 ORTHO05D009763 8.9e-11 70.1 87 49.4
FAN19G1576 Fragaria x ananassa HOM05D007801 ORTHO05D009763 1.2e-10 69.7 83 53.0
Gohir.A02G133400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.2e-10 69.7 81 48.1
Gohir.D03G044900 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.2e-10 69.7 81 49.4
Gorai.003G046000 Gossypium raimondii HOM05D007801 ORTHO05D009763 1.5e-10 69.3 81 49.4
Cc07_g15740 Coffea canephora HOM05D007801 ORTHO05D009763 2.0e-10 68.9 88 51.1
FAN26G2641 Fragaria x ananassa HOM05D007801 ORTHO05D009763 2.0e-10 68.9 83 50.6
Cpa.g.c48066 Carica papaya HOM05D007801 ORTHO05D009763 2.6e-10 68.6 81 53.1
Gohir.A02G133600 Gossypium hirsutum HOM05D007801 ORTHO05D009763 2.6e-10 68.6 84 52.4
Glyma.08G139800 Glycine max HOM05D007801 ORTHO05D009763 3.4e-10 68.2 82 47.6
Sopen04g024140 Solanum pennellii HOM05D007801 ORTHO05D009763 4.4e-10 67.8 86 51.2
Peaxi162Scf00295g00003 Petunia axillaris HOM05D007801 ORTHO05D009763 5.8e-10 67.4 84 47.6
Cfa002725 Carpinus fangiana HOM05D007801 ORTHO05D009763 7.5e-10 67.0 89 44.9
CiPaw.04G094700 Carya illinoinensis HOM05D007801 ORTHO05D009763 7.5e-10 67.0 84 46.4
Nitab4.5_0000818g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 9.9e-10 66.6 84 47.6
Peaxi162Scf00611g00068 Petunia axillaris HOM05D007801 ORTHO05D009763 9.9e-10 66.6 84 45.2
Solyc04g054340.1 Solanum lycopersicum HOM05D007801 ORTHO05D009763 9.9e-10 66.6 86 51.2
Lalb_Chr12g0203631 Lupinus albus HOM05D007801 ORTHO05D009763 1.3e-09 66.2 83 51.8
TWI74G0355 Tripterygium wilfordii HOM05D007801 ORTHO05D009763 1.3e-09 66.2 89 49.4
TAR376G1197 Trochodendron aralioides HOM05D007801 ORTHO05D009763 1.3e-09 66.2 84 48.8
Nitab4.5_0008777g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 2.2e-09 65.5 89 42.7
Glyma.05G182100 Glycine max HOM05D007801 ORTHO05D009763 2.9e-09 65.1 83 45.8
PGSC0003DMG400030102 Solanum tuberosum HOM05D007801 ORTHO05D009763 2.9e-09 65.1 84 45.2
Nitab4.5_0006788g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 4.9e-09 64.3 84 47.6
PGSC0003DMG400012798 Solanum tuberosum HOM05D007801 ORTHO05D009763 4.9e-09 64.3 85 50.6
Psat7g052320 Pisum sativum HOM05D007801 ORTHO05D009763 6.4e-09 63.9 86 46.5
Lj4g0006489 Lotus japonicus HOM05D007801 ORTHO05D009763 8.3e-09 63.5 88 40.9
CsaV3_6G045760 Cucumis sativus L. HOM05D023936 ORTHO05D009763 1.1e-08 63.2 90 43.3
Glyma.11G236500 Glycine max HOM05D007801 ORTHO05D009763 1.1e-08 63.2 84 47.6
Gohir.D12G094400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.9e-08 62.4 81 48.1
Gorai.008G102600 Gossypium raimondii HOM05D007801 ORTHO05D009763 1.9e-08 62.4 81 48.1
Oeu010979.1 Olea europaea HOM05D007801 ORTHO05D009763 1.9e-08 62.4 89 46.1
Eucgr.L03494 Eucalyptus grandis HOM05D007801 ORTHO05D009763 2.4e-08 62.0 94 45.7
TAR376G0126 Trochodendron aralioides HOM05D007801 ORTHO05D009763 2.4e-08 62.0 81 44.4
Eucgr.I00345 Eucalyptus grandis HOM05D007801 ORTHO05D009763 4.1e-08 61.2 91 44.0
Gohir.A12G076100 Gossypium hirsutum HOM05D007801 ORTHO05D009763 5.4e-08 60.8 81 46.9
SalBow3G2462 Salvia bowleyana HOM05D007801 ORTHO05D009763 5.4e-08 60.8 85 48.2
Nn5g28972 Nelumbo nucifera HOM05D007801 ORTHO05D009763 1.2e-07 59.7 85 45.9
Ca_17706_v3 Cicer arietinum L. HOM05D007801 ORTHO05D009763 1.6e-07 59.3 81 44.4
Ca_17707_v3 Cicer arietinum L. HOM05D007801 ORTHO05D009763 1.6e-07 59.3 81 44.4
Medtr8g091590 Medicago truncatula HOM05D007801 ORTHO05D009763 1.6e-07 59.3 81 44.4
Peaxi162Scf28863g00002 Petunia axillaris HOM05D007801 ORTHO05D009763 1.6e-07 59.3 78 44.9
Psat7g052400 Pisum sativum HOM05D007801 ORTHO05D009763 1.6e-07 59.3 81 45.7
TPR.G2202 Trifolium pratense HOM05D007801 ORTHO05D009763 1.6e-07 59.3 87 42.5
MELO3C007786.2 Cucumis melo HOM05D023936 ORTHO05D009763 2.1e-07 58.9 89 44.9
Nitab4.5_0004756g0030 Nicotiana tabacum HOM05D007801 ORTHO05D009763 2.7e-07 58.5 89 40.4
PGSC0003DMG400016738 Solanum tuberosum HOM05D007801 ORTHO05D009763 2.7e-07 58.5 91 39.6
Phvul.001G249500 Phaseolus vulgaris HOM05D007801 ORTHO05D009763 3.5e-07 58.2 81 45.7
Phvul.002G263100 Phaseolus vulgaris HOM05D007801 ORTHO05D009763 3.5e-07 58.2 81 44.4
Sed0002922 Sechium edule HOM05D023936 ORTHO05D009763 3.5e-07 58.2 81 44.4
Migut.H02407 Erythranthe guttata HOM05D007801 ORTHO05D009763 6.0e-07 57.4 98 43.9
Nn1g05241 Nelumbo nucifera HOM05D007801 ORTHO05D009763 6.0e-07 57.4 82 39.0
Rhsim10G0155400 Rhododendron simsii HOM05D007801 ORTHO05D009763 6.0e-07 57.4 73 43.8
Aa31LG3G17090 Aethionema arabicum HOM05D008955 ORTHO05D011140 7.8e-07 57.0 81 51.9
C02p63900 Brassica napus HOM05D008955 ORTHO05D011140 7.8e-07 57.0 81 48.1
BolC2t12458H Brassica oleracea HOM05D008955 ORTHO05D011140 1.0e-06 56.6 81 48.1
Thhalv10005237m.g Eutrema salsugineum HOM05D008955 ORTHO05D011140 1.0e-06 56.6 81 50.6
Ciclev10026857m.g Citrus clementina HOM05D007801 ORTHO05D009763 1.3e-06 56.2 93 45.2
Nitab4.5_0000727g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.3e-06 56.2 89 39.3
Atru.chr4.329 Acer truncatum HOM05D007801 ORTHO05D009763 1.7e-06 55.8 83 44.6
A02p43760 Brassica napus HOM05D008955 ORTHO05D011140 2.3e-06 55.5 81 46.9
BraA06t26134Z Brassica rapa HOM05D008955 ORTHO05D011140 2.3e-06 55.5 81 46.9
CSS0019659 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 2.3e-06 55.5 105 36.2
CSS0041778 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 2.3e-06 55.5 105 36.2
Sabra07G0071200 Salix brachista HOM05D007801 ORTHO05D009763 2.3e-06 55.5 72 48.6
Sed0023930 Sechium edule HOM05D023936 ORTHO05D009763 2.3e-06 55.5 82 46.3
BcaC01g02755 Brassica carinata HOM05D008955 ORTHO05D011140 3.0e-06 55.1 81 46.9
C03p60890 Brassica napus HOM05D008955 ORTHO05D011140 3.0e-06 55.1 81 46.9
BraA02t09300Z Brassica rapa HOM05D008955 ORTHO05D011140 3.0e-06 55.1 81 46.9
MBI02_g34270_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 3.0e-06 55.1 73 41.1
BcaB02g09884 Brassica carinata HOM05D008955 ORTHO05D011140 5.1e-06 54.3 81 48.1
A10p27450 Brassica napus HOM05D008955 ORTHO05D011140 5.1e-06 54.3 81 49.4
BraA10t44797Z Brassica rapa HOM05D008955 ORTHO05D011140 5.1e-06 54.3 81 49.4
Ah.03g142700 Amaranthus hybridus HOM05D007801 ORTHO05D009763 6.6e-06 53.9 82 45.1
Carub.0008s2606 Capsella rubella HOM05D008955 ORTHO05D011140 6.6e-06 53.9 79 41.8


User provided reference genes

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