Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 9.5e-71 270.0 131 100.0
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 7.4e-31 137.5 127 50.4
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 4.9e-27 124.8 123 49.6
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 6.7e-24 114.4 124 50.0
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 1.1e-21 107.1 130 46.2
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 1.1e-21 107.1 139 41.7
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 2.4e-21 105.9 129 39.5
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 4.0e-21 105.1 130 44.6
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 6.9e-21 104.4 131 44.3
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 1.5e-20 103.2 135 45.9
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 4.5e-20 101.7 98 48.0
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 5.8e-20 101.3 128 47.7
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 7.6e-20 100.9 135 43.7
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 1.3e-19 100.1 133 42.9
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 2.2e-19 99.4 98 55.1
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 8.4e-19 97.4 142 47.9
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 1.9e-18 96.3 136 41.9
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 1.2e-17 93.6 130 42.3
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 5.1e-16 88.2 124 44.4
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 8.7e-16 87.4 132 40.2
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 8.7e-16 87.4 124 43.5
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 1.1e-15 87.0 107 39.3
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 2.5e-15 85.9 125 43.2
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 4.3e-15 85.1 133 42.9
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 1.6e-14 83.2 111 45.9
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 6.3e-14 81.3 132 35.6
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 1.5e-12 76.6 98 38.8
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 2.0e-12 76.3 91 42.9
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 1.3e-11 73.6 84 42.9
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 1.3e-11 73.6 98 37.8
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 5.0e-11 71.6 143 33.6
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 2.5e-10 69.3 111 37.8
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 4.6e-09 65.1 99 41.4
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 4.6e-09 65.1 123 39.8
Oeu034450.1 Olea europaea HOM05D009134 ORTHO05D011284 3.3e-07 58.9 97 41.2


User provided reference genes

Program Settings