Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.5e-88 329.7 192 100.0
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 8.8e-49 197.6 180 65.0
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 4.4e-48 195.3 180 67.2
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 3.2e-43 179.1 182 63.2
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 8.8e-41 171.0 181 60.2
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 5.7e-40 168.3 182 60.4
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 5.7e-40 168.3 182 60.4
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 7.4e-40 167.9 180 62.8
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 1.7e-39 166.8 183 54.1
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.7e-39 166.8 182 59.9
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 1.1e-38 164.1 188 55.3
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 7.0e-38 161.4 184 63.0
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 1.7e-36 156.8 148 66.2
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 2.9e-36 156.0 188 58.5
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 3.8e-36 155.6 183 57.9
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 5.0e-36 155.2 184 58.7
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 8.5e-36 154.5 150 63.3
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 3.2e-35 152.5 148 66.9
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 3.2e-35 152.5 177 55.4
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 4.2e-35 152.1 181 53.0
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 1.2e-34 150.6 188 56.4
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 1.6e-34 150.2 147 59.9
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 1.6e-34 150.2 153 62.1
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.1e-34 149.8 182 52.2
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 2.1e-34 149.8 197 54.3
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 4.7e-34 148.7 178 56.2
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 8.0e-34 147.9 174 56.9
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.0e-33 147.5 189 51.3
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 1.8e-33 146.7 174 52.9
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 8.8e-33 144.4 161 58.4
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 8.8e-33 144.4 173 57.2
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 8.8e-33 144.4 151 58.3
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 3.3e-32 142.5 175 54.3
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 5.7e-32 141.7 172 57.6
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 7.5e-32 141.4 144 62.5
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 7.5e-32 141.4 181 58.0
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 2.2e-31 139.8 177 51.4
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.8e-31 139.4 181 57.5
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 6.3e-31 138.3 173 53.2
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.4e-30 137.1 148 58.1
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 4.1e-30 135.6 193 50.3
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.2e-29 134.0 192 51.6
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.6e-29 133.7 235 42.6
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 1.6e-29 133.7 147 61.2
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.0e-29 133.3 137 62.8
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 2.7e-29 132.9 150 64.0
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 3.5e-29 132.5 129 70.5
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 4.5e-29 132.1 152 65.1
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 4.5e-29 132.1 193 48.7
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 7.7e-29 131.3 130 63.1
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 7.7e-29 131.3 193 49.2
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 2.2e-28 129.8 156 51.9
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.2e-28 129.8 130 64.6
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 2.2e-28 129.8 192 50.5
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 2.2e-28 129.8 186 47.8
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 3.8e-28 129.0 195 49.7
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 3.8e-28 129.0 182 53.3
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 5.0e-28 128.6 130 67.7
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 5.0e-28 128.6 130 67.7
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 6.5e-28 128.3 139 58.3
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 6.5e-28 128.3 178 53.9
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 6.5e-28 128.3 149 61.1
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 6.5e-28 128.3 149 61.1
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 6.5e-28 128.3 183 52.5
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 1.9e-27 126.7 129 65.1
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 5.5e-27 125.2 131 69.5
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 5.5e-27 125.2 144 54.9
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 1.2e-26 124.0 118 68.6
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 2.7e-26 122.9 130 65.4
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 2.7e-26 122.9 130 65.4
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 4.7e-26 122.1 129 55.8
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 4.7e-26 122.1 172 51.2
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 6.1e-26 121.7 177 45.8
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 1.0e-25 120.9 127 59.1
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.0e-25 120.9 127 62.2
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.8e-25 120.2 150 55.3
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 3.0e-25 119.4 150 54.0
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 8.8e-25 117.9 117 65.8
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 1.2e-24 117.5 129 61.2
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 2.0e-24 116.7 185 44.9
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 7.5e-24 114.8 115 66.1
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 3.7e-23 112.5 119 63.9
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 8.3e-23 111.3 114 57.0
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.4e-22 110.5 120 50.8
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.4e-22 110.5 140 58.6
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 1.4e-22 110.5 136 51.5
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 4.1e-22 109.0 125 58.4
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 3.5e-21 105.9 139 52.5
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.1e-19 100.9 142 45.1
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 3.3e-19 99.4 141 53.2
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.1e-18 96.7 135 51.1
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 4.0e-17 92.4 97 64.9
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 8.9e-17 91.3 139 52.5
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 4.4e-16 89.0 118 44.9
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 7.0e-14 81.6 149 40.3
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 7.0e-14 81.6 126 54.0
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 1.2e-13 80.9 126 50.0
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.0e-12 77.8 62 59.7
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.7e-12 77.0 156 41.0
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 8.6e-12 74.7 58 62.1
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 8.6e-12 74.7 58 62.1
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 8.0e-10 68.2 195 31.8
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.8e-09 67.0 131 44.3
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 4.0e-09 65.9 161 44.1
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 2.6e-08 63.2 145 40.7


User provided reference genes

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