Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 0.0e+00 1416.4 793 100.0
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 3.4e-187 659.4 1048 48.4
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 8.9e-63 246.1 860 35.9
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 3.4e-62 244.2 834 35.5
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 3.1e-55 221.1 833 33.6
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 7.1e-44 183.3 808 31.4
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 2.7e-43 181.4 795 33.6
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 4.6e-43 180.6 837 30.3
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 1.3e-42 179.1 893 31.7
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 2.4e-39 168.3 448 34.8
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 8.9e-39 166.4 861 29.7
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 7.6e-38 163.3 871 29.5
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 1.4e-36 159.1 861 29.6
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 7.1e-36 156.8 841 30.0
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 1.6e-32 145.6 267 40.8
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 2.0e-30 138.7 487 32.0
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 7.6e-30 136.7 865 27.6
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 1.9e-28 132.1 285 46.0
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 5.4e-28 130.6 686 27.8
Actinidia08739 Actinidia chinensis HOM05D004299 ORTHO05D003557 4.6e-27 127.5 830 28.1
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 6.0e-27 127.1 851 27.3
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 6.0e-27 127.1 275 37.8
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 1.7e-26 125.6 275 37.5
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 5.1e-26 124.0 885 28.7
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 8.7e-26 123.2 252 49.2
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 1.5e-25 122.5 289 36.0
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 1.9e-25 122.1 817 27.8
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 2.5e-25 121.7 637 28.9
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 4.3e-25 120.9 270 35.6
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 7.4e-25 120.2 334 34.7
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 1.6e-24 119.0 227 41.9
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 1.6e-24 119.0 368 34.2
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 2.8e-24 118.2 593 29.5
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 6.2e-24 117.1 524 30.0
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 8.1e-24 116.7 510 30.2
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 1.1e-23 116.3 283 34.3
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 3.1e-23 114.8 816 27.3
Aa31LG5G13610 Aethionema arabicum HOM05D004299 ORTHO05D003557 4.0e-23 114.4 461 30.2
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 4.0e-23 114.4 248 39.1
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 4.0e-23 114.4 132 56.1
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 1.2e-22 112.8 226 41.2
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 1.5e-22 112.5 548 29.0
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 1.5e-22 112.5 262 38.9
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 3.4e-22 111.3 277 39.4
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 3.4e-22 111.3 450 29.6
Sp3g02170 Schrenkiella parvula HOM05D004299 ORTHO05D003557 3.4e-22 111.3 489 29.4
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 4.5e-22 110.9 646 27.9
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 4.5e-22 110.9 227 40.1
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 1.7e-21 109.0 832 27.5
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 2.9e-21 108.2 317 32.8
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.9e-20 105.5 834 26.4
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.9e-20 105.5 835 26.8
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 2.4e-20 105.1 306 35.0
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 2.4e-20 105.1 290 34.8
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 4.2e-20 104.4 460 30.0
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 1.2e-19 102.8 339 35.4
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.2e-19 102.8 445 29.2
Oeu061066.1 Olea europaea HOM05D004299 ORTHO05D003557 1.2e-19 102.8 846 25.1
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 2.7e-19 101.7 406 33.0
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 3.5e-19 101.3 364 30.8
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 3.5e-19 101.3 837 25.6
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 4.6e-19 100.9 806 25.8
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 4.6e-19 100.9 223 38.6
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 6.0e-19 100.5 473 31.9
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 7.9e-19 100.1 831 25.9
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 1.3e-18 99.4 409 33.5
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 1.8e-18 99.0 237 37.6
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 1.8e-18 99.0 141 47.5
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.8e-18 99.0 359 32.3
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 5.1e-18 97.4 486 28.2
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 6.7e-18 97.1 456 28.9
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 6.7e-18 97.1 467 28.3
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 6.7e-18 97.1 231 39.4
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 8.7e-18 96.7 123 50.4
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 1.9e-17 95.5 868 28.3
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 3.3e-17 94.7 477 27.9
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 1.6e-16 92.4 223 37.7
BolC3t13447H Brassica oleracea HOM05D004299 ORTHO05D003557 3.7e-16 91.3 478 27.6
CARHR077150 Cardamine hirsuta HOM05D004299 ORTHO05D003557 3.7e-16 91.3 582 25.4
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 4.8e-16 90.9 380 30.0
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 4.8e-16 90.9 380 30.0
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 4.8e-16 90.9 474 28.5
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 6.2e-16 90.5 149 41.6
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 6.2e-16 90.5 149 41.6
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 8.1e-16 90.1 813 25.7
BraA01t04590Z Brassica rapa HOM05D004299 ORTHO05D003557 8.1e-16 90.1 404 30.4
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 1.1e-15 89.7 528 27.5
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 1.4e-15 89.4 456 29.4
THA.LOC104802916 Tarenaya hassleriana HOM05D004299 ORTHO05D003557 1.4e-15 89.4 470 31.1
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 2.4e-15 88.6 400 30.8
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 2.4e-15 88.6 400 30.8
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 3.1e-15 88.2 517 28.0
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 3.1e-15 88.2 810 25.7
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 3.1e-15 88.2 363 29.5
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 3.1e-15 88.2 105 50.5
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 1.2e-14 86.3 482 28.0
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.2e-14 86.3 359 30.6
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 1.5e-14 85.9 261 34.5
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 1.5e-14 85.9 249 31.7
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 5.8e-14 84.0 802 25.6
EL10Ac3g05093 Beta vulgaris HOM05D022644 ORTHO05D003557 2.9e-13 81.6 130 43.8
Lalb_Chr09g0320301 Lupinus albus HOM05D004299 ORTHO05D003557 2.9e-13 81.6 159 42.1
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 6.5e-13 80.5 596 27.0
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 1.9e-12 79.0 802 26.7
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 3.2e-12 78.2 370 32.2
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 4.2e-12 77.8 607 25.5
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 7.1e-12 77.0 820 24.6
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 7.1e-12 77.0 877 23.8
PSO063G4917 Papaver somniferum HOM05D018639 ORTHO05D003557 7.1e-12 77.0 94 45.7
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 7.1e-12 77.0 94 46.8
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 9.3e-12 76.6 739 24.5
AUR62028156 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.2e-11 76.3 124 43.5
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 2.7e-11 75.1 939 24.9
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 2.7e-11 75.1 623 23.1
PSO478G4400 Papaver somniferum HOM05D018639 ORTHO05D003557 3.5e-11 74.7 249 30.5
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 1.0e-10 73.2 310 31.9
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 1.0e-10 73.2 256 27.7
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 1.0e-10 73.2 690 25.7
Lsat_1_v5_gn_3_37921 Lactuca sativa HOM05D004299 ORTHO05D003557 1.8e-10 72.4 147 40.8
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 3.9e-10 71.2 419 26.5
Lalb_Chr16g0376621 Lupinus albus HOM05D004299 ORTHO05D003557 6.7e-10 70.5 158 39.9
SalBow4G2051 Salvia bowleyana HOM05D004299 ORTHO05D003557 8.7e-10 70.1 109 42.2
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.1e-09 69.7 825 24.0
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 2.5e-09 68.6 336 27.7
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 7.4e-09 67.0 355 27.9
PSO478G3049 Papaver somniferum HOM05D004299 ORTHO05D003557 9.6e-09 66.6 76 52.6
Lsat_1_v5_gn_3_37901 Lactuca sativa HOM05D004299 ORTHO05D003557 3.7e-08 64.7 388 26.0
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 4.8e-08 64.3 640 24.5
HanXRQChr17g0541651 Helianthus annuus HOM05D004299 ORTHO05D003557 1.4e-07 62.8 39 71.8
Zm00001eb063140 Zea mays HOM05D021310 ORTHO05D003557 1.4e-07 62.8 47 61.7
ATR0149G001 Amborella trichopoda HOM05D033261 ORTHO05D003557 2.4e-07 62.0 109 42.2
CDE11G0117 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 2.4e-07 62.0 417 27.1
Zm00001eb251590 Zea mays HOM05D021310 ORTHO05D003557 3.1e-07 61.6 137 35.8
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 4.1e-07 61.2 45 64.4
CDE02G2994 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 9.0e-07 60.1 340 29.1
Ah.04g157210 Amaranthus hybridus HOM05D022644 ORTHO05D003557 1.2e-06 59.7 913 23.4
AUR62005909 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.2e-06 59.7 468 24.4
MELO3C026562.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.2e-06 59.7 93 41.9
MBI04_g44838_MAGBIO Magnolia biondii HOM05D027374 ORTHO05D030041 1.2e-06 59.7 576 23.3
Zm00001eb188050 Zea mays HOM05D021310 ORTHO05D003557 1.5e-06 59.3 135 34.8
MELO3C026497.2 Cucumis melo HOM05D004299 ORTHO05D003557 2.0e-06 58.9 39 64.1
Pp3c1_19370 Physcomitrium patens HOM05D027683 ORTHO05D003557 2.0e-06 58.9 44 65.9
Hund26684 Selenicereus undatus HOM05D011323 ORTHO05D010674 2.0e-06 58.9 40 65.0
HanXRQChr05g0158421 Helianthus annuus HOM05D000441 ORTHO05D003557 2.6e-06 58.5 37 70.3
HanXRQChr12g0357091 Helianthus annuus HOM05D000441 ORTHO05D003557 2.6e-06 58.5 37 70.3
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 7.6e-06 57.0 36 69.4
Lj4C698G20 Lonicera japonica HOM05D011323 ORTHO05D010674 7.6e-06 57.0 139 31.7
PSO541G1500 Papaver somniferum HOM05D018639 ORTHO05D037265 7.6e-06 57.0 258 26.4
Dinv25882 Davidia involucrata HOM05D016043 ORTHO05D010674 1.0e-05 56.6 38 68.4


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