Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 1.1e-136 490.0 247 100.0
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 5.2e-62 241.9 248 56.9
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.7e-57 226.9 255 54.1
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 4.3e-56 222.2 249 55.0
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 8.1e-55 218.0 250 52.8
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 3.1e-46 189.5 294 43.2
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 4.0e-46 189.1 264 45.8
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.9e-43 180.3 270 45.6
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 2.4e-43 179.9 239 46.4
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 4.2e-43 179.1 262 43.1
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.2e-42 177.6 273 43.6
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 2.7e-42 176.4 272 42.6
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 3.5e-42 176.0 262 42.7
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 3.5e-42 176.0 286 42.3
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 4.6e-42 175.6 279 41.9
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 7.8e-42 174.9 286 43.0
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.3e-41 174.1 275 42.9
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 2.3e-41 173.3 262 45.0
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 5.1e-41 172.2 290 42.1
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 8.7e-41 171.4 260 43.5
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 3.3e-40 169.5 244 44.3
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 6.2e-39 165.2 270 42.2
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 9.0e-38 161.4 248 43.5
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 1.2e-37 161.0 281 39.1
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 7.6e-37 158.3 260 40.4
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 3.8e-36 156.0 263 43.3
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 4.9e-36 155.6 316 39.2
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 6.6e-33 145.2 308 36.4
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 1.5e-32 144.1 262 39.3
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 4.3e-32 142.5 239 41.0
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 5.6e-32 142.1 290 37.6
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 7.3e-32 141.7 277 38.6
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 2.1e-31 140.2 231 40.3
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 2.1e-31 140.2 248 39.9
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 8.1e-31 138.3 304 35.2
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 8.1e-31 138.3 320 35.9
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 3.1e-30 136.3 318 34.3
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.5e-29 134.0 270 37.4
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 7.6e-29 131.7 235 39.1
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 8.4e-28 128.3 310 36.1
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.9e-27 127.1 277 37.5
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 3.2e-27 126.3 217 39.6
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 4.2e-27 125.9 307 34.5
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 7.1e-27 125.2 261 32.6
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 9.3e-27 124.8 261 36.0
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 3.5e-26 122.9 237 37.1
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 1.1e-24 117.9 378 30.4
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 9.6e-24 114.8 229 37.6
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 2.1e-23 113.6 305 32.1
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.4e-22 110.2 368 28.3
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 6.9e-22 108.6 263 34.6
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 6.9e-22 108.6 211 36.5
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 9.0e-22 108.2 300 33.3
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 7.6e-21 105.1 304 31.6
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 7.6e-21 105.1 159 43.4
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 8.4e-20 101.7 409 27.6
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 1.9e-19 100.5 252 31.3
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.9e-19 100.5 296 30.4
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.9e-19 100.5 241 30.7
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 3.2e-19 99.8 253 34.0
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 3.2e-19 99.8 236 31.8
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 5.5e-19 99.0 244 34.0
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.0e-17 94.7 240 34.2
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 1.8e-17 94.0 226 32.7
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 2.3e-17 93.6 355 28.5
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 3.9e-17 92.8 106 46.2
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 3.9e-17 92.8 212 32.5
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 8.7e-17 91.7 353 27.8
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 3.7e-15 86.3 274 29.6
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 8.2e-15 85.1 244 30.7
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 1.1e-14 84.7 230 30.0
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 1.8e-14 84.0 275 32.4
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 2.4e-14 83.6 256 29.3
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 2.4e-14 83.6 152 38.8
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 3.1e-14 83.2 225 29.8
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 4.1e-14 82.8 225 29.8
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 9.0e-14 81.6 158 37.3
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 1.2e-13 81.3 233 29.6
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 5.9e-13 79.0 243 28.0
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 5.9e-13 79.0 234 28.2
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 1.7e-12 77.4 245 26.9
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 2.2e-12 77.0 191 30.4
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 2.9e-12 76.6 234 28.2
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 2.9e-12 76.6 234 28.2
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 6.5e-12 75.5 151 38.4
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 3.2e-11 73.2 236 28.4
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 3.2e-11 73.2 233 28.8
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 3.2e-11 73.2 233 28.8
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 4.2e-11 72.8 233 27.9
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 7.2e-11 72.0 227 28.6
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 9.3e-11 71.6 233 28.3
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 1.2e-10 71.2 227 28.6
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 1.2e-10 71.2 246 28.9
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.2e-10 71.2 230 28.3
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.1e-10 70.5 74 58.1
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 2.1e-10 70.5 88 40.9
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 2.7e-10 70.1 71 52.1
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 2.7e-10 70.1 150 36.7
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 7.9e-10 68.6 66 54.5
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-09 67.8 79 49.4
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 1.3e-09 67.8 234 29.1
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 1.3e-09 67.8 234 29.1
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.8e-09 67.4 75 44.0
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 3.0e-09 66.6 79 50.6
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 5.1e-09 65.9 345 24.6
CDE04G0047 Ceratophyllum demersum HOM05D007667 ORTHO05D008033 1.5e-08 64.3 179 30.2
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 1.9e-08 63.9 77 46.8
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 2.5e-08 63.5 79 49.4
MBI13_g31583_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 4.3e-08 62.8 58 62.1
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 7.4e-08 62.0 79 48.1
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 1.6e-07 60.8 65 47.7
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.8e-07 60.1 79 48.1
FvH4_1g29470 Fragaria vesca HOM05D007667 ORTHO05D008033 6.3e-07 58.9 78 39.7
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 1.1e-06 58.2 79 46.8


User provided reference genes

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