Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 8.4e-140 500.4 254 100.0
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 4.5e-69 265.4 261 58.2
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 7.7e-69 264.6 253 54.5
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 2.5e-67 259.6 250 55.6
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 7.2e-67 258.1 257 53.3
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 4.7e-66 255.4 253 53.4
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 2.0e-64 250.0 253 52.6
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 2.6e-64 249.6 265 53.2
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 2.6e-64 249.6 232 56.9
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 2.6e-64 249.6 261 55.9
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 5.7e-64 248.4 252 50.8
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.7e-63 246.9 242 55.4
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 2.2e-63 246.5 232 55.2
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 1.4e-62 243.8 259 52.5
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 2.4e-62 243.0 232 53.9
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.2e-61 240.7 256 53.1
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 3.5e-61 239.2 263 50.6
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.0e-60 237.7 238 53.4
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 1.8e-57 226.9 254 50.4
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 5.7e-56 221.9 239 54.0
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.2e-53 214.2 260 48.5
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 4.6e-53 212.2 233 51.5
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 7.8e-53 211.5 265 49.1
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 7.8e-53 211.5 240 52.1
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 3.0e-52 209.5 265 47.2
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 3.0e-52 209.5 253 46.2
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 3.9e-52 209.1 265 46.8
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 5.0e-52 208.8 228 48.2
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 6.6e-52 208.4 257 46.3
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 8.6e-52 208.0 262 47.7
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 3.3e-51 206.1 257 45.9
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 4.7e-50 202.2 256 46.1
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.0e-49 201.1 232 48.3
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 1.0e-49 201.1 238 47.1
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 1.4e-49 200.7 253 47.4
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 1.8e-49 200.3 259 45.2
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 3.1e-49 199.5 204 53.4
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 8.9e-49 198.0 249 45.8
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 8.9e-49 198.0 249 45.4
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 8.9e-49 198.0 249 45.4
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.5e-48 197.2 235 45.1
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 2.0e-48 196.8 257 45.5
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 4.4e-48 195.7 237 44.3
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.9e-47 192.2 249 45.8
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 8.3e-47 191.4 230 47.8
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.4e-46 190.7 232 47.4
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.9e-46 190.3 230 47.4
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 4.6e-45 185.7 258 43.4
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 1.3e-44 184.1 262 44.7
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 9.5e-43 177.9 205 49.3
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 1.6e-42 177.2 253 41.5
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.4e-41 174.1 256 41.8
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 5.2e-41 172.2 256 41.8
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 2.6e-40 169.9 253 44.3
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 5.8e-40 168.7 259 41.3
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 3.7e-39 166.0 256 41.0
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.4e-38 164.1 265 40.4
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.4e-38 164.1 253 40.7
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 5.4e-38 162.2 289 37.0
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 5.4e-38 162.2 255 39.6
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 1.2e-37 161.0 256 39.8
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 2.7e-37 159.8 291 36.8
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 4.6e-37 159.1 256 39.5
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 7.8e-37 158.3 251 42.2
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.0e-36 157.9 245 40.8
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.0e-36 157.9 232 42.2
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 7.3e-35 151.8 251 40.6
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.8e-33 147.1 244 37.3
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 8.9e-33 144.8 245 39.6
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 1.5e-32 144.1 258 40.3
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 3.4e-32 142.9 239 38.5
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 7.6e-32 141.7 227 38.3
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 9.9e-32 141.4 244 40.6
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 6.4e-31 138.7 269 38.7
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 1.6e-29 134.0 250 36.0
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 1.6e-29 134.0 275 34.5
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 6.0e-29 132.1 240 37.1
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 5.1e-28 129.0 299 33.8
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.4e-25 120.9 237 34.6
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 8.9e-25 118.2 112 56.2
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 8.4e-23 111.7 251 33.5
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 5.4e-22 109.0 318 29.2
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.6e-21 107.5 87 58.6
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 3.5e-21 106.3 84 61.9
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 4.6e-21 105.9 83 59.0
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 2.3e-20 103.6 250 32.8
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 5.1e-20 102.4 83 56.6
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 6.6e-20 102.1 83 56.6
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 6.6e-20 102.1 83 56.6
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 6.6e-20 102.1 83 56.6
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 6.6e-20 102.1 83 56.6
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 6.6e-20 102.1 83 56.6
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 6.6e-20 102.1 83 56.6
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 8.7e-20 101.7 83 56.6
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 3.3e-19 99.8 83 54.2
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.3e-18 97.8 83 54.2
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 6.2e-18 95.5 237 30.4
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 5.3e-17 92.4 140 35.7
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 5.8e-16 89.0 243 30.0
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.2e-13 81.3 81 45.7
FAN14G2589 Fragaria x ananassa HOM05D007404 ORTHO05D009281 6.0e-13 79.0 167 35.3
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 1.9e-11 73.9 103 45.6
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 8.4e-07 58.5 97 37.1
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 8.4e-07 58.5 65 41.5
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 1.4e-06 57.8 104 33.7
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 2.4e-06 57.0 155 32.3
AUR62028858 Chenopodium quinoa HOM05D002304 ORTHO05D002363 2.4e-06 57.0 97 38.1
QL10p020791 Quercus lobata HOM05D002304 ORTHO05D002363 5.5e-06 55.8 54 46.3
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 7.1e-06 55.5 53 49.1
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 7.1e-06 55.5 53 49.1
Aqoxy5G03200 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 9.3e-06 55.1 54 50.0


User provided reference genes

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