Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G123900 Manihot esculenta HOM05D035592 ORTHO05D250982 4.4e-152 541.2 262 100.0
Manes.07G123804 Manihot esculenta HOM05D035592 ORTHO05D250214 3.4e-104 382.1 261 73.2
Manes.07G123800 Manihot esculenta HOM05D035592 ORTHO05D251039 3.8e-87 325.5 256 64.1
AUR62014490 Chenopodium quinoa HOM05D000604 ORTHO05D000990 9.0e-12 75.1 179 28.5
Os02g0133000 Oryza sativa ssp. japonica HOM05D000604 ORTHO05D000990 9.0e-12 75.1 178 25.8
CSS0000528 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D000990 2.9e-10 70.1 199 25.1
EL10Ac1g00628 Beta vulgaris HOM05D000604 ORTHO05D000990 1.1e-09 68.2 205 25.4
Nitab4.5_0003682g0050 Nicotiana tabacum HOM05D000604 ORTHO05D000990 1.9e-09 67.4 179 25.1
Nitab4.5_0003729g0010 Nicotiana tabacum HOM05D000604 ORTHO05D000990 1.9e-09 67.4 179 25.1
Hund17183 Selenicereus undatus HOM05D000604 ORTHO05D000990 1.9e-09 67.4 202 24.8
PGSC0003DMG400017127 Solanum tuberosum HOM05D000604 ORTHO05D000990 2.4e-09 67.0 234 21.8
MSTRG.1253 Avicennia marina HOM05D000604 ORTHO05D000990 3.2e-09 66.6 179 26.3
BcaB04g20264 Brassica carinata HOM05D000604 ORTHO05D000990 7.1e-09 65.5 200 26.5
Actinidia15358 Actinidia chinensis HOM05D000604 ORTHO05D000990 9.3e-09 65.1 179 23.5
Lalb_Chr18g0057791 Lupinus albus HOM05D000604 ORTHO05D000990 9.3e-09 65.1 185 24.9
PSO541G1300 Papaver somniferum HOM05D000604 ORTHO05D000990 9.3e-09 65.1 185 25.4
TAR369G0209 Trochodendron aralioides HOM05D000604 ORTHO05D000990 9.3e-09 65.1 193 24.9
RcHm_v2.0_Chr4g0416761 Rosa chinensis HOM05D000604 ORTHO05D000990 1.2e-08 64.7 183 24.6
AUR62034507 Chenopodium quinoa HOM05D000604 ORTHO05D000990 1.6e-08 64.3 173 26.0
SEGI_06482 Sequoiadendron giganteum HOM05D000604 ORTHO05D000990 1.6e-08 64.3 199 25.1
Peaxi162Scf00028g00189 Petunia axillaris HOM05D000604 ORTHO05D000990 2.1e-08 63.9 179 24.0
Cc10_g02490 Coffea canephora HOM05D000604 ORTHO05D000990 2.7e-08 63.5 179 26.3
FvH4_4g15100 Fragaria vesca HOM05D000604 ORTHO05D000990 7.8e-08 62.0 183 23.5
CDE07G0023 Ceratophyllum demersum HOM05D000604 ORTHO05D000990 1.3e-07 61.2 200 25.0
Lsat_1_v5_gn_5_26940 Lactuca sativa HOM05D000604 ORTHO05D000990 1.3e-07 61.2 214 22.0
TAR636G0572 Trochodendron aralioides HOM05D000604 ORTHO05D000990 1.7e-07 60.8 205 22.0
Migut.N00172 Erythranthe guttata HOM05D000604 ORTHO05D000990 5.1e-07 59.3 181 24.3
ECA246G3467 Erigeron canadensis HOM05D000604 ORTHO05D000990 6.6e-07 58.9 179 24.6
HPP92_017183 Vanilla planifolia HOM05D000604 ORTHO05D000990 6.6e-07 58.9 177 26.6
Gorai.002G023700 Gossypium raimondii HOM05D000604 ORTHO05D000990 8.7e-07 58.5 181 23.2
CsaV3_1G046690 Cucumis sativus L. HOM05D000604 ORTHO05D000990 1.1e-06 58.2 208 23.1
MD16G1189200 Malus domestica HOM05D000604 ORTHO05D000990 1.1e-06 58.2 183 24.0
Nn1g02245 Nelumbo nucifera HOM05D000604 ORTHO05D000990 1.5e-06 57.8 174 23.6
Duzib212G0262 Durio zibethinus HOM05D000604 ORTHO05D000990 1.9e-06 57.4 181 22.7
Glyma.10G249800 Glycine max HOM05D000604 ORTHO05D000990 1.9e-06 57.4 180 23.3
Potri.008G150500 Populus trichocarpa HOM05D000604 ORTHO05D000990 1.9e-06 57.4 179 23.5
Thecc.04G227700 Theobroma cacao HOM05D000604 ORTHO05D000990 1.9e-06 57.4 181 22.7
Cpa.g.sc683.1 Carica papaya HOM05D000604 ORTHO05D000990 2.5e-06 57.0 175 24.0
HanXRQChr05g0151301 Helianthus annuus HOM05D000604 ORTHO05D000990 2.5e-06 57.0 178 25.3
Ciclev10005160m.g Citrus clementina HOM05D000604 ORTHO05D000990 3.3e-06 56.6 181 24.3
Lj5g0017021 Lotus japonicus HOM05D000604 ORTHO05D000990 3.3e-06 56.6 181 23.8
PSO210G5179 Papaver somniferum HOM05D000604 ORTHO05D000990 4.3e-06 56.2 154 24.7
Zm00001eb132310 Zea mays HOM05D000604 ORTHO05D000990 5.6e-06 55.8 177 24.9
Duzib052G1102 Durio zibethinus HOM05D000604 ORTHO05D000990 7.3e-06 55.5 181 22.1
Lalb_Chr09g0319741 Lupinus albus HOM05D000604 ORTHO05D000990 7.3e-06 55.5 181 24.3
SGA_v2.0_scaffold166G38360 Striga asiatica HOM05D000604 ORTHO05D000990 7.3e-06 55.5 181 24.3
CANSAT78G1101 Cannabis sativa HOM05D000604 ORTHO05D000990 9.6e-06 55.1 175 24.0
CiPaw.02G095500 Carya illinoinensis HOM05D000604 ORTHO05D000990 9.6e-06 55.1 181 22.7
Glyma.20G143800 Glycine max HOM05D000604 ORTHO05D000990 9.6e-06 55.1 180 22.8
Manes.03G180900 Manihot esculenta HOM05D000604 ORTHO05D000990 9.6e-06 55.1 180 21.1
SGA_v2.0_scaffold10G05101 Striga asiatica HOM05D000604 ORTHO05D000990 9.6e-06 55.1 181 25.4


User provided reference genes

Program Settings