Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.3e-310 1068.9 542 100.0
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 1.2e-108 397.9 543 48.6
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 7.9e-95 352.1 691 41.0
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.8e-94 350.9 675 40.9
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 2.6e-90 337.0 595 43.4
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 2.6e-90 337.0 584 43.7
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 9.9e-90 335.1 695 39.3
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.7e-89 334.3 640 41.7
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 5.1e-86 322.8 482 48.1
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.3e-81 308.1 593 40.8
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 1.7e-81 307.8 599 41.2
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 2.2e-81 307.4 597 40.9
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.9e-80 304.3 578 41.9
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 7.9e-79 298.9 297 56.6
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 1.4e-75 288.1 515 41.4
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 2.4e-75 287.3 490 40.4
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 1.6e-68 264.6 592 38.5
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 2.4e-67 260.8 538 37.2
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 5.3e-67 259.6 596 39.3
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.6e-66 257.3 602 39.4
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.5e-66 256.5 602 38.9
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 1.0e-65 255.4 541 38.8
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.1e-64 251.9 378 44.4
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.9e-64 251.1 706 34.1
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 4.2e-64 250.0 603 38.3
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 4.2e-64 250.0 538 37.0
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 9.4e-64 248.8 538 37.0
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 7.9e-63 245.7 414 41.8
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 5.1e-62 243.0 499 38.7
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 8.8e-62 242.3 631 36.3
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 4.4e-61 240.0 609 36.5
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.4e-59 235.0 587 36.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 1.4e-59 235.0 563 36.1
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 9.1e-59 232.3 341 46.9
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 2.2e-57 227.6 555 39.3
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.4e-56 224.9 545 38.0
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.4e-56 224.9 459 37.7
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.9e-56 224.6 498 37.6
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 4.2e-56 223.4 441 38.1
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.6e-55 221.5 608 35.9
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.1e-55 221.1 556 37.8
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 8.8e-54 215.7 552 36.4
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.5e-53 214.9 603 34.7
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 2.6e-53 214.2 587 34.2
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 7.4e-53 212.6 598 35.6
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 9.7e-53 212.2 403 40.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 2.2e-52 211.1 435 39.1
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 8.2e-52 209.1 573 33.5
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.1e-51 208.8 496 36.3
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.4e-51 208.4 589 36.3
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 7.0e-51 206.1 283 45.9
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 9.1e-51 205.7 427 37.9
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.6e-50 204.9 438 38.4
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 5.9e-50 203.0 280 48.6
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 7.7e-50 202.6 507 35.1
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 6.5e-49 199.5 605 33.1
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 8.5e-49 199.1 388 42.3
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 5.5e-48 196.4 498 35.1
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 5.5e-48 196.4 538 34.6
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 5.5e-48 196.4 594 34.3
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 9.4e-48 195.7 625 31.0
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.2e-47 195.3 574 32.9
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 8.0e-47 192.6 520 34.6
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.4e-46 191.8 525 34.3
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 3.0e-46 190.7 560 33.6
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 3.0e-46 190.7 465 37.4
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 5.2e-46 189.9 553 34.4
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 2.0e-45 188.0 418 39.2
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 7.5e-45 186.0 200 53.5
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 7.5e-45 186.0 517 33.5
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 9.7e-45 185.7 555 33.2
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 4.8e-44 183.3 269 46.8
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 8.2e-44 182.6 443 34.8
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.4e-43 181.0 576 32.3
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 3.1e-43 180.6 514 35.8
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 5.3e-43 179.9 609 33.3
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 1.3e-41 175.3 601 32.9
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 2.2e-41 174.5 560 33.8
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 2.2e-41 174.5 476 33.2
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 6.5e-41 172.9 408 35.3
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.2e-39 168.7 233 43.8
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.7e-39 167.5 418 34.4
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 3.0e-38 164.1 203 48.8
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 5.2e-38 163.3 392 36.7
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 8.8e-38 162.5 504 33.5
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.5e-37 161.8 239 46.0
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 3.4e-37 160.6 473 33.4
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 4.4e-37 160.2 578 32.2
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 9.8e-37 159.1 553 33.1
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 4.1e-35 153.7 509 33.0
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 3.5e-34 150.6 380 35.8
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 7.7e-34 149.4 576 31.6
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 7.7e-34 149.4 426 32.6
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.2e-31 142.1 395 34.4
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.2e-31 142.1 517 33.1
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 3.6e-31 140.6 540 30.6
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 1.8e-30 138.3 242 38.0
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 8.8e-30 136.0 588 32.7
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 2.2e-28 131.3 515 30.7
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 2.4e-27 127.9 184 39.1
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 6.8e-22 109.8 459 27.5
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 1.0e-17 95.9 315 29.2
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 8.9e-14 82.8 337 27.6
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 3.2e-11 74.3 186 31.7
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 3.2e-11 74.3 117 39.3
COL.COLO4_28901 Corchorus olitorius HOM05D006718 ORTHO05D008492 3.0e-09 67.8 271 29.2
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 7.3e-08 63.2 274 31.0
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 2.8e-07 61.2 113 38.1
SHI21244 Sapria himalayana HOM05D000023 ORTHO05D002750 2.3e-06 58.2 127 37.0
CBR_g22941 Chara braunii HOM05D006718 ORTHO05D008492 5.2e-06 57.0 268 26.5


User provided reference genes

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