Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 7.8e-37 156.8 87 100.0
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 2.8e-18 95.1 86 67.4
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 4.7e-18 94.4 89 65.2
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.8e-17 92.4 89 67.4
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 4.0e-17 91.3 86 65.1
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 4.0e-17 91.3 89 62.9
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 5.2e-17 90.9 89 61.8
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 5.2e-17 90.9 89 65.2
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 6.8e-17 90.5 94 64.9
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 8.9e-17 90.1 104 56.7
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 1.5e-16 89.4 102 54.9
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 1.5e-16 89.4 92 65.2
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 2.0e-16 89.0 87 63.2
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 4.4e-16 87.8 83 63.9
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 4.4e-16 87.8 89 61.8
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 5.8e-16 87.4 88 63.6
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 9.9e-16 86.7 95 60.0
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.2e-15 85.5 103 54.4
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 8.4e-15 83.6 89 60.7
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 1.9e-14 82.4 90 57.8
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.4e-14 82.0 104 53.8
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 3.2e-14 81.6 89 60.7
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 9.2e-14 80.1 87 63.2
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.2e-13 79.7 86 59.3
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 1.6e-13 79.3 87 63.2
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 2.7e-13 78.6 88 59.1
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 4.6e-13 77.8 87 57.5
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 4.6e-13 77.8 89 56.2
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 6.0e-13 77.4 91 57.1
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 7.8e-13 77.0 90 57.8
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 7.8e-13 77.0 90 57.8
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 3.9e-12 74.7 87 60.9
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.1e-12 74.3 105 49.5
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 8.7e-12 73.6 92 56.5
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.7e-12 73.6 104 51.0
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.5e-11 72.0 88 58.0
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 3.3e-11 71.6 88 56.8
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 4.3e-11 71.2 86 50.0
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 7.3e-11 70.5 87 52.9
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 9.6e-11 70.1 96 52.1
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.6e-10 69.3 81 54.3
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.6e-10 69.3 100 50.0
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.1e-10 68.9 83 50.6
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 2.8e-10 68.6 81 53.1
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 4.8e-10 67.8 84 52.4
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 8.1e-10 67.0 83 49.4
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 8.1e-10 67.0 86 53.5
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 2.4e-09 65.5 86 52.3
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 2.4e-09 65.5 86 52.3
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 4.0e-09 64.7 85 52.9
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 5.3e-09 64.3 86 51.2
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.2e-08 63.2 86 50.0
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 3.4e-08 61.6 94 52.1
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.4e-08 61.6 77 53.2
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.7e-07 59.3 76 50.0
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.9e-07 58.5 77 49.4
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 2.9e-07 58.5 76 52.6
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 2.4e-06 55.5 41 75.6
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 7.1e-06 53.9 57 57.9


User provided reference genes

Program Settings