Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G004601 Manihot esculenta HOM05D005524 ORTHO05D005392 2.1e-23 111.7 63 100.0
Potri.009G063600 Populus trichocarpa HOM05D005524 ORTHO05D005392 9.7e-13 76.3 63 71.4
Sabra16G0164700 Salix brachista HOM05D005524 ORTHO05D005392 1.3e-12 75.9 63 71.4
Potri.001G268800 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.2e-12 75.1 63 73.0
Thecc.01G412500 Theobroma cacao HOM05D005524 ORTHO05D005392 4.1e-11 70.9 63 71.4
TWI73G1008 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 1.2e-10 69.3 63 69.8
TWI09G0988 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 5.9e-10 67.0 63 68.3
Potri.006G056200 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.2e-09 65.1 63 61.9
Dinv18091 Davidia involucrata HOM05D005524 ORTHO05D005392 2.9e-09 64.7 63 63.5
CSS0022867 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 3.8e-09 64.3 63 60.3
Eucgr.H02490 Eucalyptus grandis HOM05D005524 ORTHO05D005392 3.8e-09 64.3 63 65.1
CSS0022323 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 5.0e-09 63.9 63 61.9
CSS0036301 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 8.5e-09 63.2 63 58.7
Haze_03228 Corylus avellana HOM05D000430 ORTHO05D000305 1.4e-08 62.4 67 62.7
CSS0036543 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 1.9e-08 62.0 63 57.1
CSS0011241 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 2.5e-08 61.6 63 58.7
ClCG10G012450 Citrullus lanatus HOM05D005524 ORTHO05D005392 2.5e-08 61.6 63 60.3
Hma1.2p1_0293F.1_g116270 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 3.2e-08 61.2 64 59.4
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 5.5e-08 60.5 63 58.7
BcaNung07196 Brassica carinata HOM05D005524 ORTHO05D005392 7.2e-08 60.1 63 57.1
CiPaw.13G003600 Carya illinoinensis HOM05D005524 ORTHO05D005392 7.2e-08 60.1 65 61.5
Sed0016248 Sechium edule HOM05D005524 ORTHO05D005392 7.2e-08 60.1 64 56.2
BcaB06g29217 Brassica carinata HOM05D005524 ORTHO05D005392 9.4e-08 59.7 63 57.1
Duzib093G2098 Durio zibethinus HOM05D005524 ORTHO05D005392 9.4e-08 59.7 64 62.5
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 1.2e-07 59.3 63 57.1
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 1.2e-07 59.3 63 57.1
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 1.2e-07 59.3 63 57.1
ClCG09G004270 Citrullus lanatus HOM05D005524 ORTHO05D005392 1.2e-07 59.3 64 56.2
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 1.2e-07 59.3 64 60.9
AT2G41905 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 1.6e-07 58.9 63 55.6
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 1.6e-07 58.9 63 58.7
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 1.6e-07 58.9 63 57.1
Duzib128G1940 Durio zibethinus HOM05D005524 ORTHO05D005392 1.6e-07 58.9 65 60.0
Potri.016G052001 Populus trichocarpa HOM05D005524 ORTHO05D005392 1.6e-07 58.9 63 57.1
Thecc.05G164300 Theobroma cacao HOM05D005524 ORTHO05D005392 1.6e-07 58.9 64 59.4
BcaC02g07275 Brassica carinata HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 55.6
A03p23470 Brassica napus HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 55.6
A04p31910 Brassica napus HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 55.6
C04p69380 Brassica napus HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 55.6
BolC4t28440H Brassica oleracea HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 55.6
BraA03t11563Z Brassica rapa HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 55.6
BraA04t18649Z Brassica rapa HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 55.6
Carub.0004s2422 Capsella rubella HOM05D005524 ORTHO05D005392 2.1e-07 58.5 63 57.1
Atru.chr1.974 Acer truncatum HOM05D005524 ORTHO05D005392 2.7e-07 58.2 67 58.2
AL4G40250 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 2.7e-07 58.2 63 55.6
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 2.7e-07 58.2 63 57.1
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 2.7e-07 58.2 63 57.1
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 2.7e-07 58.2 63 58.7
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 2.7e-07 58.2 63 55.6
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 2.7e-07 58.2 63 58.7
Duzib106G1083 Durio zibethinus HOM05D005524 ORTHO05D005392 2.7e-07 58.2 64 60.9
Sed0007200 Sechium edule HOM05D005524 ORTHO05D005392 2.7e-07 58.2 64 54.7
Aa31LG10G12450 Aethionema arabicum HOM05D005524 ORTHO05D005392 3.6e-07 57.8 63 55.6
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 4.6e-07 57.4 63 57.1
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 4.6e-07 57.4 63 57.1
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 4.6e-07 57.4 63 57.1
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 4.6e-07 57.4 63 58.7
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 4.6e-07 57.4 63 57.1
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 4.6e-07 57.4 63 57.1
CARHR137000 Cardamine hirsuta HOM05D005524 ORTHO05D005392 4.6e-07 57.4 63 55.6
Lalb_Chr12g0205751 Lupinus albus HOM05D005524 ORTHO05D005392 4.6e-07 57.4 64 59.4
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 6.1e-07 57.0 63 54.0
Atru.chr1.1006 Acer truncatum HOM05D005524 ORTHO05D005392 7.9e-07 56.6 67 56.7
BcaB01g03426 Brassica carinata HOM05D005524 ORTHO05D005392 7.9e-07 56.6 63 52.4
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 7.9e-07 56.6 63 57.1
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 7.9e-07 56.6 63 57.1
Eucgr.A02403 Eucalyptus grandis HOM05D005524 ORTHO05D005392 7.9e-07 56.6 63 57.1
Manes.10G145300 Manihot esculenta HOM05D005524 ORTHO05D005392 7.9e-07 56.6 65 58.5
AL5G39310 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 1.0e-06 56.2 64 54.7
Sp4g24180 Schrenkiella parvula HOM05D005524 ORTHO05D005392 1.0e-06 56.2 63 54.0
Sed0003541 Sechium edule HOM05D005524 ORTHO05D005392 1.4e-06 55.8 64 53.1
BcaC07g40149 Brassica carinata HOM05D005524 ORTHO05D005392 1.8e-06 55.5 63 57.1
CSS0030443 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 3.0e-06 54.7 63 55.6
Sed0014034 Sechium edule HOM05D005524 ORTHO05D005392 3.0e-06 54.7 64 51.6
Lalb_Chr03g0033981 Lupinus albus HOM05D005524 ORTHO05D005392 3.9e-06 54.3 61 62.3
Prupe.2G010700 Prunus persica HOM05D005524 ORTHO05D005392 3.9e-06 54.3 70 51.4
SHI24452 Sapria himalayana HOM05D005524 ORTHO05D005392 3.9e-06 54.3 61 55.7
Lalb_Chr01g0008091 Lupinus albus HOM05D005524 ORTHO05D005392 5.1e-06 53.9 61 62.3
Aqoxy2G00114 Aquilegia oxysepala HOM05D005524 ORTHO05D005392 6.7e-06 53.5 63 50.8
BcaC01g05321 Brassica carinata HOM05D005524 ORTHO05D005392 6.7e-06 53.5 63 50.8
C03p27990 Brassica napus HOM05D005524 ORTHO05D005392 6.7e-06 53.5 63 50.8
BolC3t15170H Brassica oleracea HOM05D005524 ORTHO05D005392 6.7e-06 53.5 63 50.8
Lalb_Chr19g0132101 Lupinus albus HOM05D005524 ORTHO05D005392 8.8e-06 53.1 61 55.7
Phvul.001G137100 Phaseolus vulgaris HOM05D005524 ORTHO05D005392 8.8e-06 53.1 60 58.3


User provided reference genes

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