Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 1.1e-270 936.0 462 100.0
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 4.1e-185 651.7 457 71.3
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 6.8e-172 607.8 468 63.9
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 9.8e-171 604.0 452 64.6
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.7e-170 603.2 459 66.0
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 2.2e-170 602.8 459 66.2
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 4.7e-165 585.1 455 61.3
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 6.1e-165 584.7 460 64.3
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 2.9e-162 575.9 457 63.2
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 2.0e-160 569.7 461 63.3
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 3.9e-159 565.5 460 63.9
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 1.1e-158 563.9 455 59.8
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 3.1e-156 555.8 460 61.1
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 4.0e-156 555.4 457 59.7
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 5.2e-156 555.1 455 58.0
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 8.9e-156 554.3 456 60.3
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 2.2e-154 549.7 456 58.3
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.1e-153 547.4 457 59.3
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 7.8e-152 541.2 456 58.6
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 1.7e-151 540.0 462 57.4
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 7.3e-150 534.6 380 67.9
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 4.7e-149 531.9 461 56.2
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 2.3e-148 529.6 455 58.7
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 2.6e-147 526.2 496 55.8
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 3.4e-147 525.8 458 58.1
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 3.4e-147 525.8 455 54.5
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 4.4e-147 525.4 459 58.2
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 8.3e-146 521.2 464 55.8
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 4.1e-145 518.8 436 59.6
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.9e-142 510.0 409 61.9
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 5.6e-142 508.4 465 57.4
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 7.3e-142 508.1 463 56.8
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 7.3e-142 508.1 458 56.1
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 9.5e-142 507.7 499 52.1
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 1.6e-141 506.9 455 53.8
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 2.1e-141 506.5 453 54.5
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 2.1e-141 506.5 464 54.1
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 2.8e-141 506.1 457 54.5
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 6.2e-141 505.0 458 56.1
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 2.3e-140 503.1 452 56.9
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 6.8e-140 501.5 458 56.1
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.5e-139 500.4 451 55.9
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 5.8e-139 498.4 461 51.6
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 7.6e-139 498.0 462 53.2
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 7.6e-139 498.0 464 52.8
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.9e-138 496.1 458 57.0
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 2.9e-138 496.1 457 53.8
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 3.8e-138 495.7 464 52.6
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.1e-137 494.2 463 55.9
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.9e-137 493.4 449 56.8
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 5.4e-137 491.9 458 55.5
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.2e-136 490.7 453 53.9
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 2.7e-136 489.6 455 54.3
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 2.7e-136 489.6 454 52.0
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 4.6e-136 488.8 461 52.9
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 6.0e-136 488.4 457 53.0
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 1.3e-135 487.3 455 51.6
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 3.0e-135 486.1 459 52.7
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 3.9e-135 485.7 450 54.2
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 5.1e-135 485.3 457 53.2
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 8.6e-135 484.6 455 50.8
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.8e-132 476.9 454 54.4
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 8.9e-132 474.6 459 50.8
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 1.2e-131 474.2 462 55.2
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 9.9e-131 471.1 455 50.8
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 1.9e-129 466.8 455 49.9
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 2.3e-127 459.9 455 49.0
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 2.3e-127 459.9 475 53.1
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 1.5e-126 457.2 462 51.3
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 1.9e-126 456.8 471 49.0
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 4.3e-126 455.7 467 48.0
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 3.6e-125 452.6 475 52.0
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 4.8e-125 452.2 456 49.1
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 4.0e-124 449.1 465 51.6
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 5.8e-123 445.3 469 50.3
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 4.9e-122 442.2 446 51.1
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 6.0e-120 435.3 502 49.6
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 1.3e-119 434.1 467 50.1
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 2.3e-119 433.3 402 55.7
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 6.2e-117 425.2 561 43.7
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 1.8e-116 423.7 463 47.3
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 2.6e-115 419.9 433 49.0
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 8.4e-114 414.8 461 49.0
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 9.3e-113 411.4 461 48.2
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 2.3e-111 406.8 447 49.7
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 3.9e-111 406.0 475 46.5
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 2.5e-110 403.3 463 45.8
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 1.0e-106 391.3 468 45.1
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 6.5e-106 388.7 341 59.2
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.5e-102 376.7 477 45.3
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 1.8e-100 370.5 458 45.6
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 7.2e-97 358.6 479 42.8
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 3.6e-96 356.3 371 48.8
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 3.9e-95 352.8 460 43.7
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-94 350.5 464 43.1
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 1.2e-91 341.3 468 41.9
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 2.6e-91 340.1 449 42.8
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.9e-90 336.7 370 48.6
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 5.3e-84 315.8 458 40.2
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.1e-78 298.1 353 43.1
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 7.0e-76 288.9 479 37.6
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.9e-73 280.8 236 60.6
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 8.8e-71 271.9 360 43.1
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.0e-70 270.8 378 41.0
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 2.4e-60 237.3 297 44.4
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 1.0e-55 221.9 315 40.0
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 3.0e-55 220.3 191 57.1
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 4.9e-45 186.4 279 40.5
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 4.4e-38 163.3 469 28.6
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 1.9e-36 157.9 402 25.9
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 8.6e-34 149.1 246 37.0
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 1.5e-33 148.3 132 59.8
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 2.6e-30 137.5 216 35.2
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 9.2e-28 129.0 115 53.9
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 5.6e-25 119.8 109 53.2
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.6e-24 118.2 180 38.3
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.4e-22 110.5 128 46.1
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 2.9e-21 107.5 86 62.8
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 9.0e-07 59.3 101 34.7


User provided reference genes

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