Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 2.8e-85 318.5 159 100.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 7.0e-44 181.0 139 72.7
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 9.2e-28 127.5 139 55.4
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.2e-27 127.1 137 56.2
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 6.6e-26 121.3 135 53.3
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 3.3e-25 119.0 131 56.5
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 4.3e-25 118.6 165 49.1
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 5.6e-25 118.2 130 50.8
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 4.7e-24 115.2 124 58.1
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 8.1e-24 114.4 122 55.7
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 1.5e-22 110.2 137 50.4
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 4.4e-22 108.6 124 47.6
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.8e-21 105.5 136 44.1
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 4.9e-21 105.1 137 46.0
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 4.9e-21 105.1 136 44.9
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 6.4e-21 104.8 137 50.4
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 8.4e-21 104.4 136 44.1
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 1.1e-20 104.0 144 47.9
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 7.1e-20 101.3 124 45.2
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 9.3e-20 100.9 132 47.0
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.2e-19 100.5 132 46.2
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.5e-19 99.0 137 45.3
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 2.3e-18 96.3 108 46.3
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 8.7e-18 94.4 121 47.1
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.1e-17 94.0 133 44.4
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.5e-17 93.6 130 42.3
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 2.5e-17 92.8 129 45.7
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 2.5e-17 92.8 128 46.1
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.3e-17 92.0 149 43.0
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 2.8e-16 89.4 114 47.4
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.6e-16 89.0 117 47.0
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 3.6e-16 89.0 130 46.9
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 6.2e-16 88.2 119 44.5
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 8.1e-16 87.8 118 47.5
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 8.1e-16 87.8 118 47.5
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 1.4e-15 87.0 125 44.8
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 2.4e-15 86.3 126 45.2
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 2.4e-15 86.3 129 44.2
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 3.1e-15 85.9 118 50.8
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 3.1e-15 85.9 114 45.6
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 4.0e-15 85.5 127 43.3
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 4.0e-15 85.5 114 46.5
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.2e-14 84.0 146 41.1
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.2e-14 84.0 134 43.3
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.5e-14 83.6 121 48.8
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.5e-14 83.6 121 48.8
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.5e-14 83.6 114 45.6
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 2.0e-14 83.2 126 45.2
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 2.0e-14 83.2 125 44.0
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.0e-14 83.2 140 42.9
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.6e-14 82.8 121 45.5
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 3.4e-14 82.4 126 44.4
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 4.4e-14 82.0 115 45.2
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 4.4e-14 82.0 114 43.0
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 5.8e-14 81.6 114 43.0
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.7e-13 80.1 125 41.6
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.2e-13 79.7 108 47.2
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.2e-13 79.7 128 40.6
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.9e-13 79.3 108 46.3
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 2.9e-13 79.3 131 39.7
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 3.8e-13 79.0 124 44.4
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 8.4e-13 77.8 127 42.5
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.1e-12 77.4 127 41.7
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 1.1e-12 77.4 106 43.4
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 1.9e-12 76.6 123 39.0
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 2.4e-12 76.3 134 41.8
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 3.2e-12 75.9 134 42.5
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 3.2e-12 75.9 123 41.5
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 5.4e-12 75.1 134 41.8
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 5.4e-12 75.1 113 38.1
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 2.7e-11 72.8 135 40.7
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 3.5e-11 72.4 106 43.4
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 6.0e-11 71.6 141 36.2
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 2.3e-10 69.7 143 42.7
Nitab4.5_0004507g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.0e-10 69.3 131 39.7
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 3.9e-10 68.9 115 40.0
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 3.3e-09 65.9 121 37.2
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 3.3e-09 65.9 121 37.2
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 1.6e-08 63.5 118 39.0
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 1.6e-08 63.5 121 38.8
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 4.8e-08 62.0 126 35.7
Nitab4.5_0000304g0050 Nicotiana tabacum HOM05D007735 ORTHO05D009638 8.1e-08 61.2 83 47.0
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.4e-07 60.5 120 37.5
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.4e-07 60.5 120 37.5
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.8e-07 60.1 86 41.9
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 5.3e-07 58.5 131 36.6
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 2.0e-06 56.6 126 37.3
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 2.6e-06 56.2 131 35.9
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 3.4e-06 55.8 104 39.4
HPP92_018844 Vanilla planifolia HOM05D026889 ORTHO05D009638 7.6e-06 54.7 115 36.5
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 7.6e-06 54.7 115 36.5


User provided reference genes

Program Settings