Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G218400 Manihot esculenta HOM05D005224 ORTHO05D006372 7.6e-45 183.3 85 100.0
Manes.05G062300 Manihot esculenta HOM05D005224 ORTHO05D006372 6.6e-41 170.2 85 92.9
Haze_04931 Corylus avellana HOM05D005224 ORTHO05D006372 4.3e-40 167.5 83 90.4
Cfa005919 Carpinus fangiana HOM05D005224 ORTHO05D006372 5.6e-40 167.2 83 89.2
CANSAT25G2283 Cannabis sativa HOM05D005224 ORTHO05D006372 9.6e-40 166.4 85 90.6
Duzib133G0273 Durio zibethinus HOM05D005224 ORTHO05D006372 3.6e-39 164.5 85 90.6
Ciclev10033216m.g Citrus clementina HOM05D005224 ORTHO05D006372 6.2e-39 163.7 85 91.8
Gohir.A12G130700 Gossypium hirsutum HOM05D005224 ORTHO05D006372 8.1e-39 163.3 85 88.2
Gohir.D12G134600 Gossypium hirsutum HOM05D005224 ORTHO05D006372 8.1e-39 163.3 85 88.2
Gorai.008G145500 Gossypium raimondii HOM05D005224 ORTHO05D006372 8.1e-39 163.3 85 88.2
Thecc.01G299700 Theobroma cacao HOM05D005224 ORTHO05D006372 1.4e-38 162.5 85 88.2
Duzib211G0376 Durio zibethinus HOM05D005224 ORTHO05D006372 3.1e-38 161.4 85 88.2
ClCG10G010880 Citrullus lanatus HOM05D005224 ORTHO05D006372 5.3e-38 160.6 85 87.1
Gohir.A08G042400 Gossypium hirsutum HOM05D005224 ORTHO05D006372 5.3e-38 160.6 82 87.8
Gohir.D08G052200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 5.3e-38 160.6 82 87.8
Gorai.004G052300 Gossypium raimondii HOM05D005224 ORTHO05D006372 5.3e-38 160.6 82 87.8
QL12p028550 Quercus lobata HOM05D005224 ORTHO05D006372 5.3e-38 160.6 83 85.5
Cpa.g.sc19.280 Carica papaya HOM05D005224 ORTHO05D006372 6.9e-38 160.2 83 86.7
CiPaw.07G108200 Carya illinoinensis HOM05D005224 ORTHO05D006372 6.9e-38 160.2 83 85.5
Gohir.A08G075800 Gossypium hirsutum HOM05D005224 ORTHO05D006372 6.9e-38 160.2 85 88.2
Gorai.004G089700 Gossypium raimondii HOM05D005224 ORTHO05D006372 6.9e-38 160.2 85 88.2
TWI23G0618 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 6.9e-38 160.2 83 86.7
TWI14G1007 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 1.2e-37 159.5 83 86.7
Sed0018249 Sechium edule HOM05D005224 ORTHO05D006372 1.5e-37 159.1 85 85.9
Gohir.D08G085200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 2.0e-37 158.7 85 87.1
MD03G1287600 Malus domestica HOM05D005224 ORTHO05D006372 2.0e-37 158.7 83 88.0
THA.LOC104817499 Tarenaya hassleriana HOM05D005224 ORTHO05D006372 2.0e-37 158.7 83 84.3
Aqoxy2G02950 Aquilegia oxysepala HOM05D005224 ORTHO05D006372 2.6e-37 158.3 81 85.2
Dinv29760 Davidia involucrata HOM05D005224 ORTHO05D006372 3.4e-37 157.9 84 88.1
Dinv44366 Davidia involucrata HOM05D005224 ORTHO05D006372 4.5e-37 157.5 85 89.4
Eucgr.K03475 Eucalyptus grandis HOM05D005224 ORTHO05D006372 4.5e-37 157.5 87 86.2
Phvul.001G207200 Phaseolus vulgaris HOM05D005224 ORTHO05D006372 4.5e-37 157.5 82 89.0
Prupe.8G260800 Prunus persica HOM05D005224 ORTHO05D006372 4.5e-37 157.5 83 86.7
Sp4g29630 Schrenkiella parvula HOM05D005224 ORTHO05D006372 4.5e-37 157.5 83 84.3
Sed0019318 Sechium edule HOM05D005224 ORTHO05D006372 4.5e-37 157.5 85 85.9
AL4G47260 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 5.8e-37 157.1 83 84.3
Cc04_g11150 Coffea canephora HOM05D005224 ORTHO05D006372 5.8e-37 157.1 83 86.7
Glyma.03G214500 Glycine max HOM05D005224 ORTHO05D006372 5.8e-37 157.1 83 86.7
CsaV3_4G000760 Cucumis sativus L. HOM05D005224 ORTHO05D006372 7.6e-37 156.8 85 83.5
Thhalv10001702m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 9.9e-37 156.4 83 83.1
Hund11874 Selenicereus undatus HOM05D005224 ORTHO05D006372 9.9e-37 156.4 83 86.7
Potri.014G129600 Populus trichocarpa HOM05D005224 ORTHO05D006372 1.7e-36 155.6 83 85.5
Ah.02g128370 Amaranthus hybridus HOM05D005224 ORTHO05D006372 2.2e-36 155.2 83 85.5
arahy.Tifrunner.gnm1.ann1.8KN71Z Arachis hypogaea HOM05D005224 ORTHO05D006372 2.2e-36 155.2 83 86.7
arahy.Tifrunner.gnm1.ann1.EEQ3S4 Arachis hypogaea HOM05D005224 ORTHO05D006372 2.2e-36 155.2 83 86.7
arahy.Tifrunner.gnm1.ann1.U5VDRT Arachis hypogaea HOM05D005224 ORTHO05D006372 2.2e-36 155.2 83 86.7
FvH4_2g25680 Fragaria vesca HOM05D005224 ORTHO05D006372 2.2e-36 155.2 85 84.7
FAN15G2088 Fragaria x ananassa HOM05D005224 ORTHO05D006372 2.2e-36 155.2 85 84.7
FAN20G0551 Fragaria x ananassa HOM05D005224 ORTHO05D006372 2.2e-36 155.2 85 84.7
FAN27G2170 Fragaria x ananassa HOM05D005224 ORTHO05D006372 2.2e-36 155.2 85 84.7
Glyma.19G211200 Glycine max HOM05D005224 ORTHO05D006372 2.2e-36 155.2 83 85.5
HanXRQChr17g0538761 Helianthus annuus HOM05D005224 ORTHO05D006372 2.2e-36 155.2 83 85.5
TAR365G0183 Trochodendron aralioides HOM05D005224 ORTHO05D006372 2.2e-36 155.2 82 86.6
AT2G47690 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 2.9e-36 154.8 83 83.1
CARHR143080 Cardamine hirsuta HOM05D005224 ORTHO05D006372 2.9e-36 154.8 83 83.1
PSO210G7006 Papaver somniferum HOM05D005224 ORTHO05D006372 2.9e-36 154.8 84 82.1
vmacro03691 Vaccinium macrocarpon HOM05D005224 ORTHO05D006372 2.9e-36 154.8 83 85.5
ECA246G3542 Erigeron canadensis HOM05D005224 ORTHO05D006372 3.8e-36 154.5 79 89.9
Thhalv10006347m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 3.8e-36 154.5 83 83.1
HanXRQChr06g0173941 Helianthus annuus HOM05D005224 ORTHO05D006372 3.8e-36 154.5 85 84.7
Lj1g0012977 Lotus japonicus HOM05D005224 ORTHO05D006372 3.8e-36 154.5 83 86.7
RcHm_v2.0_Chr6g0293941 Rosa chinensis HOM05D005224 ORTHO05D006372 3.8e-36 154.5 85 83.5
AT3G62790 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 4.9e-36 154.1 83 83.1
EL10Ac3g05917 Beta vulgaris HOM05D005224 ORTHO05D006372 4.9e-36 154.1 83 85.5
Carub.0005s2944 Capsella rubella HOM05D005224 ORTHO05D006372 4.9e-36 154.1 83 83.1
MELO3C017960.2 Cucumis melo HOM05D005224 ORTHO05D006372 4.9e-36 154.1 85 82.4
HPP92_017223 Vanilla planifolia HOM05D005224 ORTHO05D006372 4.9e-36 154.1 85 84.7
CSS0034435 Camellia sinensis var. sinensis HOM05D005224 ORTHO05D006372 6.4e-36 153.7 75 90.7
Nn4g25791 Nelumbo nucifera HOM05D005224 ORTHO05D006372 6.4e-36 153.7 84 84.5
BcaC02g12549 Brassica carinata HOM05D005224 ORTHO05D006372 8.4e-36 153.3 83 83.1
C04p00180 Brassica napus HOM05D005224 ORTHO05D006372 8.4e-36 153.3 83 83.1
BolC4t21665H Brassica oleracea HOM05D005224 ORTHO05D006372 8.4e-36 153.3 83 83.1
Migut.D00213 Erythranthe guttata HOM05D005224 ORTHO05D006372 8.4e-36 153.3 83 83.1
Lsat_1_v5_gn_3_24761 Lactuca sativa HOM05D005224 ORTHO05D006372 8.4e-36 153.3 75 92.0
PSO210G2815 Papaver somniferum HOM05D005224 ORTHO05D006372 8.4e-36 153.3 79 87.3
Lalb_Chr15g0078521 Lupinus albus HOM05D005224 ORTHO05D006372 1.1e-35 152.9 82 85.4
Carub.0004s3041 Capsella rubella HOM05D005224 ORTHO05D006372 1.4e-35 152.5 83 81.9
CDE09G0321 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 1.4e-35 152.5 84 84.5
Hma1.2p1_1185F.1_g264980 Hydrangea macrophylla HOM05D005224 ORTHO05D006372 1.4e-35 152.5 84 84.5
Lalb_Chr04g0259841 Lupinus albus HOM05D005224 ORTHO05D006372 1.4e-35 152.5 83 84.3
Psat3g022120 Pisum sativum HOM05D005224 ORTHO05D006372 1.4e-35 152.5 83 86.7
PGR042G0105 Punica granatum HOM05D005224 ORTHO05D006372 1.4e-35 152.5 83 84.3
Actinidia24346 Actinidia chinensis HOM05D001413 ORTHO05D001385 1.9e-35 152.1 74 90.5
BcaC07g40762 Brassica carinata HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 81.9
BcaC07g42731 Brassica carinata HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 81.9
A05p00270 Brassica napus HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 81.9
A09p54640 Brassica napus HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 81.9
C08p37540 Brassica napus HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 81.9
BraA05t19024Z Brassica rapa HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 84.3
BraA09t40875Z Brassica rapa HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 81.9
PSO832G3231 Papaver somniferum HOM05D005224 ORTHO05D006372 1.9e-35 152.1 79 86.1
Sp5g00730 Schrenkiella parvula HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 81.9
TPR.G9599 Trifolium pratense HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 84.3
BcaB02g08753 Brassica carinata HOM05D005224 ORTHO05D006372 2.4e-35 151.8 83 81.9
BcaNung06420 Brassica carinata HOM05D005224 ORTHO05D006372 2.4e-35 151.8 83 81.9
PSO170G2085 Papaver somniferum HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 81.0
Medtr7g108810 Medicago truncatula HOM05D001413 ORTHO05D001385 3.2e-35 151.4 84 82.1
GSVIVG01035146001 Vitis vinifera HOM05D005224 ORTHO05D006372 3.2e-35 151.4 79 87.3
AL5G45570 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 4.2e-35 151.0 83 81.9
Migut.D02475 Erythranthe guttata HOM05D005224 ORTHO05D006372 5.4e-35 150.6 83 80.7
Potri.002G204800 Populus trichocarpa HOM05D005224 ORTHO05D006372 5.4e-35 150.6 76 90.8
BolC6t38010H Brassica oleracea HOM05D005224 ORTHO05D006372 7.1e-35 150.2 74 90.5
CARHR173060 Cardamine hirsuta HOM05D005224 ORTHO05D006372 7.1e-35 150.2 83 81.9
DCAR_027069 Daucus carota HOM05D005224 ORTHO05D006372 7.1e-35 150.2 78 89.7
MBI18_g06871_MAGBIO Magnolia biondii HOM05D005224 ORTHO05D006372 7.1e-35 150.2 71 95.8
Aa31LG1G29010 Aethionema arabicum HOM05D005224 ORTHO05D006372 9.3e-35 149.8 83 80.7
CDE02G3260 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 9.3e-35 149.8 83 81.9
BcaB02g07318 Brassica carinata HOM05D005224 ORTHO05D006372 1.2e-34 149.4 83 83.1
A07p26090 Brassica napus HOM05D005224 ORTHO05D006372 1.2e-34 149.4 74 89.2
Zm00001eb039670 Zea mays HOM05D005224 ORTHO05D006372 1.6e-34 149.1 86 79.1
C06p28410 Brassica napus HOM05D005224 ORTHO05D006372 2.1e-34 148.7 74 90.5
unitig_0.g663 Utricularia gibba HOM05D005224 ORTHO05D006372 2.1e-34 148.7 82 82.9
ATR0796G245 Amborella trichopoda HOM05D005224 ORTHO05D006372 2.7e-34 148.3 78 85.9
Sc25g0004000 Simmondsia chinensis HOM05D005224 ORTHO05D006372 3.5e-34 147.9 102 70.6
Actinidia32220 Actinidia chinensis HOM05D005224 ORTHO05D006372 1.0e-33 146.4 75 85.3
Os08g0556600 Oryza sativa ssp. japonica HOM05D005224 ORTHO05D006372 5.1e-33 144.1 74 85.1
COL.COLO4_23352 Corchorus olitorius HOM05D005224 ORTHO05D006372 8.7e-33 143.3 104 68.3
Nitab4.5_0011375g0020 Nicotiana tabacum HOM05D005224 ORTHO05D006372 2.5e-32 141.7 83 75.9
TAR370G0003 Trochodendron aralioides HOM05D005224 ORTHO05D006372 2.1e-31 138.7 63 96.8
Peaxi162Scf00589g00224 Petunia axillaris HOM05D005224 ORTHO05D006372 3.7e-31 137.9 65 90.8
ECA240G1836 Erigeron canadensis HOM05D002891 ORTHO05D003369 4.8e-31 137.5 76 82.9
SHI19781 Sapria himalayana HOM05D005224 ORTHO05D006372 2.4e-30 135.2 75 76.0
Solyc11g005880.2 Solanum lycopersicum HOM05D005224 ORTHO05D006372 3.1e-30 134.8 62 93.5
Sopen11g001830 Solanum pennellii HOM05D005224 ORTHO05D006372 3.1e-30 134.8 62 93.5
SalBow3G4056 Salvia bowleyana HOM05D005224 ORTHO05D006372 5.3e-30 134.0 108 63.0
Nitab4.5_0000805g0100 Nicotiana tabacum HOM05D005224 ORTHO05D006372 9.0e-30 133.3 61 93.4
PGSC0003DMG400028681 Solanum tuberosum HOM05D005224 ORTHO05D006372 1.2e-29 132.9 61 93.4
CAN.G652.1 Capsicum annuum HOM05D005224 ORTHO05D006372 5.8e-29 130.6 60 91.7
BcaC08g45239 Brassica carinata HOM05D005224 ORTHO05D006372 2.4e-27 125.2 57 93.0
TAR633G1838 Trochodendron aralioides HOM05D005224 ORTHO05D006372 1.1e-24 116.3 63 84.1
Oeu054123.1 Olea europaea HOM05D005224 ORTHO05D006372 3.3e-24 114.8 50 96.0
BraA07t30257Z Brassica rapa HOM05D005224 ORTHO05D006372 9.6e-24 113.2 50 94.0
HanXRQChr08g0223921 Helianthus annuus HOM05D005224 ORTHO05D006372 1.6e-23 112.5 50 94.0
HanXRQChr09g0263651 Helianthus annuus HOM05D005224 ORTHO05D006372 6.2e-23 110.5 50 92.0
CiPaw.08G095500 Carya illinoinensis HOM05D005224 ORTHO05D006372 2.4e-22 108.6 59 83.1
MD02G1095800 Malus domestica HOM05D005224 ORTHO05D006372 4.0e-22 107.8 49 89.8
CBR_g52287 Chara braunii HOM05D005224 ORTHO05D006372 5.8e-21 104.0 77 59.7
Mapoly0155s0025 Marchantia polymorpha HOM05D005224 ORTHO05D006372 1.1e-19 99.8 83 59.0
Pp3c7_20680 Physcomitrium patens HOM05D005224 ORTHO05D006372 1.2e-18 96.3 83 53.0
AagrBONN_evm.TU.Sc2ySwM_344.1353 Anthoceros agrestis HOM05D005224 ORTHO05D006372 2.7e-18 95.1 80 55.0
Pp3c11_13470 Physcomitrium patens HOM05D005224 ORTHO05D006372 3.5e-18 94.7 83 51.8
MCO16G429 Micromonas commoda HOM05D005224 ORTHO05D006372 5.9e-13 77.4 74 47.3
arahy.Tifrunner.gnm1.ann1.YEW5FF Arachis hypogaea HOM05D005224 ORTHO05D006372 2.2e-07 58.9 29 86.2
AUR62015428 Chenopodium quinoa HOM05D005224 ORTHO05D006372 1.1e-06 56.6 23 95.7


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