Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 6.0e-157 558.1 451 100.0
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 3.1e-121 439.5 410 83.4
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 4.7e-109 399.1 393 82.7
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 4.7e-109 399.1 403 76.9
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 5.2e-108 395.6 421 77.4
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-107 394.4 403 81.6
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 4.4e-107 392.5 407 78.9
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 6.3e-106 388.7 407 70.3
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.0e-104 383.6 411 75.7
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 5.9e-104 382.1 393 77.1
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.7e-103 380.6 411 78.6
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.9e-102 377.1 407 68.8
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 3.2e-102 376.3 396 70.5
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 5.5e-102 375.6 403 66.3
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 9.4e-102 374.8 405 76.0
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.7e-101 373.2 412 64.6
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.0e-100 371.3 404 79.5
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 3.0e-100 369.8 396 74.5
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.2e-100 369.0 415 75.7
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 6.7e-100 368.6 408 69.9
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 3.3e-99 366.3 342 82.2
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 2.2e-98 363.6 353 83.6
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 4.8e-98 362.5 407 67.8
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.3e-98 362.1 427 73.5
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.1e-97 361.3 389 71.7
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.8e-97 360.5 414 76.8
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.8e-97 360.5 430 71.6
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.1e-97 359.8 415 65.3
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.6e-96 357.5 421 73.6
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 7.7e-96 355.1 411 72.7
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 1.3e-95 354.4 418 69.6
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.2e-95 353.6 427 71.0
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.5e-94 349.0 427 70.7
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 5.5e-94 349.0 419 68.0
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 5.5e-94 349.0 408 68.6
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 7.2e-94 348.6 430 68.8
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 2.1e-93 347.1 425 71.5
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.7e-93 345.9 246 80.1
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 4.7e-93 345.9 246 80.1
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.4e-92 344.4 400 73.8
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 6.8e-92 342.0 410 71.5
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.5e-91 340.9 417 70.3
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.0e-91 340.5 362 76.0
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 2.6e-91 340.1 413 65.4
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 3.4e-91 339.7 396 71.7
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 5.7e-91 339.0 423 67.6
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.2e-90 337.0 417 67.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 4.8e-90 335.9 427 67.7
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 6.3e-90 335.5 207 91.3
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 6.3e-90 335.5 427 65.8
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 8.3e-90 335.1 490 59.8
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 2.4e-89 333.6 415 76.9
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.2e-88 331.3 335 83.0
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.6e-88 330.9 405 64.2
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.0e-88 330.5 405 68.9
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 4.5e-88 329.3 407 67.8
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 2.9e-87 326.6 419 69.7
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 8.6e-87 325.1 417 68.8
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 1.1e-86 324.7 427 57.6
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 7.2e-86 322.0 419 67.1
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 6.1e-85 318.9 407 73.2
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 6.1e-85 318.9 252 75.4
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 1.8e-84 317.4 420 66.7
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 4.0e-84 316.2 372 66.7
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 6.8e-84 315.5 406 66.5
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.2e-83 314.7 416 70.4
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 7.5e-83 312.0 416 67.1
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.3e-82 311.2 419 63.2
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 2.8e-82 310.1 408 72.1
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 7.0e-81 305.4 412 62.6
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 5.9e-80 302.4 408 64.7
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 5.9e-80 302.4 416 61.5
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 7.8e-80 302.0 429 66.4
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 8.6e-79 298.5 423 55.1
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.9e-78 297.4 422 69.2
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 8.9e-76 288.5 433 63.5
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.7e-74 284.3 257 67.7
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 9.2e-73 278.5 492 55.3
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 3.5e-72 276.6 420 61.0
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 4.6e-72 276.2 351 65.5
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 6.0e-72 275.8 258 60.9
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 5.0e-71 272.7 209 75.1
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.9e-70 270.8 210 75.2
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.3e-70 269.6 159 83.6
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 4.0e-68 263.1 159 81.8
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 4.0e-68 263.1 229 69.4
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 8.3e-66 255.4 159 77.4
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.1e-65 255.0 147 85.0
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.2e-64 251.5 159 74.8
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 3.0e-63 246.9 159 78.6
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 4.7e-61 239.6 159 74.8
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 4.0e-60 236.5 159 73.0
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 4.0e-60 236.5 159 73.0
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 4.0e-60 236.5 159 73.0
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 4.0e-60 236.5 159 73.0
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 4.0e-60 236.5 202 69.8
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 2.0e-59 234.2 159 72.3
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 3.4e-59 233.4 201 69.2
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 2.7e-56 223.8 257 57.2
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.0e-55 221.9 255 56.9
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 2.4e-52 210.7 159 66.7
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 6.8e-52 209.1 159 64.8
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.6e-51 207.2 380 61.6
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.1e-46 191.8 158 61.4
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.1e-46 191.8 158 61.4
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.3e-44 183.0 160 60.0
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.3e-44 183.0 160 60.0
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.0e-39 168.7 152 60.5
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 2.3e-31 141.0 161 50.3
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.2e-26 124.4 161 46.0
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 7.1e-25 119.4 160 43.8
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.9e-22 111.3 156 43.6
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.8e-15 88.2 139 39.6
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 1.3e-13 82.0 56 69.6
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 2.6e-11 74.3 109 40.4
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.2e-10 71.2 95 46.3
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 7.9e-08 62.8 92 50.0
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.0e-07 62.4 234 56.8
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 2.0e-06 58.2 104 37.5
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 3.3e-06 57.4 82 42.7


User provided reference genes

Program Settings