Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9075 Avicennia marina HOM05D005233 ORTHO05D006308 1.8e-56 222.2 105 100.0
SGA_v2.0_scaffold103G30010 Striga asiatica HOM05D005233 ORTHO05D006308 6.1e-28 127.5 74 77.0
SalBow4G2901 Salvia bowleyana HOM05D005233 ORTHO05D006308 1.1e-26 123.2 69 81.2
Oeu043884.1 Olea europaea HOM05D005233 ORTHO05D006308 1.4e-24 116.3 72 70.8
Cfa013368 Carpinus fangiana HOM05D005233 ORTHO05D006308 1.6e-23 112.8 96 59.4
Cc08_g09660 Coffea canephora HOM05D000189 ORTHO05D006308 4.5e-23 111.3 72 73.6
Haze_21891 Corylus avellana HOM05D005233 ORTHO05D006308 7.7e-23 110.5 73 68.5
Dinv23373 Davidia involucrata HOM05D005233 ORTHO05D006308 7.7e-23 110.5 95 58.9
GSVIVG01035619001 Vitis vinifera HOM05D005233 ORTHO05D006308 7.7e-23 110.5 90 58.9
Migut.A00200 Erythranthe guttata HOM05D005233 ORTHO05D006308 2.9e-22 108.6 65 80.0
CiPaw.07G203900 Carya illinoinensis HOM05D005233 ORTHO05D006308 1.9e-21 105.9 72 66.7
Sopen08g020400 Solanum pennellii HOM05D005233 ORTHO05D006308 2.5e-21 105.5 72 66.7
DCAR_003122 Daucus carota HOM05D005233 ORTHO05D006308 3.2e-21 105.1 72 69.4
TPR.G24514 Trifolium pratense HOM05D005233 ORTHO05D006308 7.2e-21 104.0 72 70.8
Carub.0006s1005 Capsella rubella HOM05D005233 ORTHO05D006308 1.2e-20 103.2 73 65.8
Lalb_Chr23g0269651 Lupinus albus HOM05D005233 ORTHO05D006308 1.2e-20 103.2 72 66.7
Nitab4.5_0001515g0020 Nicotiana tabacum HOM05D005233 ORTHO05D006308 1.2e-20 103.2 69 68.1
Rhsim02G0177000 Rhododendron simsii HOM05D005233 ORTHO05D006308 1.6e-20 102.8 75 62.7
Medtr3g109650 Medicago truncatula HOM05D005233 ORTHO05D006308 2.7e-20 102.1 72 62.5
Eucgr.C00552 Eucalyptus grandis HOM05D005233 ORTHO05D006308 3.6e-20 101.7 76 64.5
RcHm_v2.0_Chr6g0306321 Rosa chinensis HOM05D005233 ORTHO05D006308 3.6e-20 101.7 73 67.1
TAR624G0675 Trochodendron aralioides HOM05D005233 ORTHO05D006308 3.6e-20 101.7 80 60.0
Dinv27906 Davidia involucrata HOM05D005233 ORTHO05D006308 1.0e-19 100.1 73 65.8
Gorai.001G026900 Gossypium raimondii HOM05D005233 ORTHO05D006308 1.0e-19 100.1 70 67.1
Medtr1g006695 Medicago truncatula HOM05D005233 ORTHO05D006308 1.0e-19 100.1 68 70.6
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 1.0e-19 100.1 68 70.6
HanXRQChr13g0402051 Helianthus annuus HOM05D005233 ORTHO05D006308 1.4e-19 99.8 68 66.2
Aqoxy7G03897 Aquilegia oxysepala HOM05D005233 ORTHO05D006308 2.3e-19 99.0 84 56.0
BcaNung01936 Brassica carinata HOM05D005233 ORTHO05D006308 2.3e-19 99.0 75 62.7
Sp6g32030 Schrenkiella parvula HOM05D005233 ORTHO05D006308 2.3e-19 99.0 68 67.6
Glyma.14G145900 Glycine max HOM05D005233 ORTHO05D006308 3.0e-19 98.6 68 69.1
TWI63G1465 Tripterygium wilfordii HOM05D005233 ORTHO05D006308 4.0e-19 98.2 68 69.1
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 5.2e-19 97.8 75 64.0
Thhalv10013150m.g Eutrema salsugineum HOM05D005233 ORTHO05D006308 5.2e-19 97.8 68 66.2
QL05p071834 Quercus lobata HOM05D005233 ORTHO05D006308 5.2e-19 97.8 75 62.7
VMungo1309G2609 Vigna mungo HOM05D005233 ORTHO05D006308 5.2e-19 97.8 69 63.8
MELO3C011138.2 Cucumis melo HOM05D005233 ORTHO05D006308 8.8e-19 97.1 68 67.6
FAN20G2629 Fragaria x ananassa HOM05D005233 ORTHO05D006308 8.8e-19 97.1 94 54.3
Gohir.D07G025800 Gossypium hirsutum HOM05D005233 ORTHO05D006308 8.8e-19 97.1 68 67.6
Thecc.09G045600 Theobroma cacao HOM05D005233 ORTHO05D006308 1.2e-18 96.7 68 69.1
ECA246G0608 Erigeron canadensis HOM05D005233 ORTHO05D006308 2.0e-18 95.9 69 60.9
ClCG08G012200 Citrullus lanatus HOM05D005233 ORTHO05D006308 2.6e-18 95.5 68 66.2
Ah.16g105800 Amaranthus hybridus HOM05D005233 ORTHO05D006308 4.4e-18 94.7 69 62.3
Duzib168G1333 Durio zibethinus HOM05D005233 ORTHO05D006308 4.4e-18 94.7 68 66.2
Gohir.A07G022400 Gossypium hirsutum HOM05D005233 ORTHO05D006308 4.4e-18 94.7 68 66.2
Potri.018G044400 Populus trichocarpa HOM05D005233 ORTHO05D006308 4.4e-18 94.7 68 66.2
TPR.G15100 Trifolium pratense HOM05D005233 ORTHO05D006308 4.4e-18 94.7 73 60.3
A02p01080 Brassica napus HOM05D005233 ORTHO05D006308 5.7e-18 94.4 72 62.5
BraA02t05088Z Brassica rapa HOM05D005233 ORTHO05D006308 5.7e-18 94.4 72 62.5
CsaV3_2G030830 Cucumis sativus L. HOM05D005233 ORTHO05D006308 5.7e-18 94.4 68 66.2
PGR031G2838 Punica granatum HOM05D005233 ORTHO05D006308 7.5e-18 94.0 68 66.2
HanXRQChr08g0234411 Helianthus annuus HOM05D005233 ORTHO05D006308 9.8e-18 93.6 68 64.7
BolC2t06473H Brassica oleracea HOM05D005233 ORTHO05D006308 1.7e-17 92.8 73 64.4
PSO210G1892 Papaver somniferum HOM05D005233 ORTHO05D006308 2.2e-17 92.4 75 60.0
ECA233G5498 Erigeron canadensis HOM05D005233 ORTHO05D006308 6.3e-17 90.9 68 61.8
Glyma.04G084400 Glycine max HOM05D005233 ORTHO05D006308 1.4e-16 89.7 69 58.0
C02p05220 Brassica napus HOM05D005233 ORTHO05D006308 1.8e-16 89.4 68 61.8
Nn8g39123 Nelumbo nucifera HOM05D005233 ORTHO05D006308 4.1e-16 88.2 75 60.0
HPP92_005574 Vanilla planifolia HOM05D005233 ORTHO05D006308 1.2e-15 86.7 69 59.4
CANSAT35G1732 Cannabis sativa HOM05D005233 ORTHO05D006308 2.7e-15 85.5 75 57.3
Cpa.g.sc78.3 Carica papaya HOM05D005233 ORTHO05D006308 4.5e-15 84.7 63 61.9
Lsat_1_v5_gn_5_33641 Lactuca sativa HOM05D005233 ORTHO05D006308 1.7e-14 82.8 58 67.2
SEGI_28740 Sequoiadendron giganteum HOM05D005233 ORTHO05D006308 3.8e-14 81.6 76 48.7
MBI04_g40323_MAGBIO Magnolia biondii HOM05D005233 ORTHO05D006308 8.5e-14 80.5 69 59.4
Atru.BG.8.p Acer truncatum HOM05D005233 ORTHO05D006308 1.5e-13 79.7 62 59.7
Ca_12755_v3 Cicer arietinum L. HOM05D005233 ORTHO05D006308 1.9e-13 79.3 61 67.2
Os01g0725600 Oryza sativa ssp. japonica HOM05D005233 ORTHO05D006308 2.5e-13 79.0 68 54.4
SGA_v2.0_scaffold103G30008 Striga asiatica HOM05D005233 ORTHO05D006308 4.2e-13 78.2 56 67.9
Lj7C700G7 Lonicera japonica HOM05D005233 ORTHO05D006308 1.6e-12 76.3 58 65.5
EL10Ac2g04015 Beta vulgaris HOM05D005233 ORTHO05D006308 2.1e-12 75.9 59 61.0
Lsat_1_v5_gn_6_22621 Lactuca sativa HOM05D005233 ORTHO05D006308 2.1e-12 75.9 71 56.3
CBR_g29831 Chara braunii HOM05D005233 ORTHO05D006308 2.7e-12 75.5 118 39.8
Prupe.1G447800 Prunus persica HOM05D005233 ORTHO05D006308 2.7e-12 75.5 58 60.3
Pp3c21_18100 Physcomitrium patens HOM05D005233 ORTHO05D006308 3.6e-12 75.1 87 43.7
AUR62009274 Chenopodium quinoa HOM05D005233 ORTHO05D006308 8.0e-12 73.9 58 62.1
CAN.G400.13 Capsicum annuum HOM05D005233 ORTHO05D006308 1.0e-11 73.6 57 57.9
MD15G1092900 Malus domestica HOM05D005233 ORTHO05D006308 1.4e-11 73.2 57 63.2
AUR62039706 Chenopodium quinoa HOM05D005233 ORTHO05D006308 2.3e-11 72.4 60 60.0
Sabra18G0044300 Salix brachista HOM05D005233 ORTHO05D006308 3.0e-11 72.0 57 63.2
COL.COLO4_20973 Corchorus olitorius HOM05D005233 ORTHO05D006308 4.0e-11 71.6 78 50.0
FvH4_2g35481 Fragaria vesca HOM05D005233 ORTHO05D006308 5.2e-11 71.2 57 64.9
FAN27G0538 Fragaria x ananassa HOM05D005233 ORTHO05D006308 5.2e-11 71.2 57 64.9
Ca_15589_v3 Cicer arietinum L. HOM05D005233 ORTHO05D006308 8.8e-11 70.5 57 59.6
Phvul.009G110000 Phaseolus vulgaris HOM05D005233 ORTHO05D006308 8.8e-11 70.5 58 60.3
RcHm_v2.0_Chr6g0306381 Rosa chinensis HOM05D005233 ORTHO05D006308 2.6e-10 68.9 57 63.2
arahy.Tifrunner.gnm1.ann1.8C5A90 Arachis hypogaea HOM05D005233 ORTHO05D006308 3.4e-10 68.6 62 58.1
arahy.Tifrunner.gnm1.ann1.MXXD4G Arachis hypogaea HOM05D005233 ORTHO05D006308 3.4e-10 68.6 62 58.1
Phvul.001G074200 Phaseolus vulgaris HOM05D005233 ORTHO05D006308 3.4e-10 68.6 57 61.4
Hund19511 Selenicereus undatus HOM05D005233 ORTHO05D006308 3.4e-10 68.6 58 58.6
vmacro11057 Vaccinium macrocarpon HOM05D005233 ORTHO05D006308 4.4e-10 68.2 60 53.3
Aa31LG3G15610 Aethionema arabicum HOM05D005233 ORTHO05D006308 7.5e-10 67.4 59 54.2
Hma1.2p1_0049F.1_g028560 Hydrangea macrophylla HOM05D005233 ORTHO05D006308 7.5e-10 67.4 71 49.3
CSS0036341 Camellia sinensis var. sinensis HOM05D005233 ORTHO05D006308 4.9e-09 64.7 61 55.7
BcaC03g13376 Brassica carinata HOM05D005233 ORTHO05D006308 8.3e-09 63.9 58 56.9
CSS0025156 Camellia sinensis var. sinensis HOM05D005233 ORTHO05D006308 1.4e-08 63.2 61 54.1
CBR_g6400 Chara braunii HOM05D000189 ORTHO05D004078 4.1e-08 61.6 70 41.4
Mapoly0011s0008 Marchantia polymorpha HOM05D000189 ORTHO05D012441 4.1e-08 61.6 66 42.4
CBR_g766 Chara braunii HOM05D000189 ORTHO05D004078 1.0e-06 57.0 70 42.9
Lalb_Chr11g0068661 Lupinus albus HOM05D000189 ORTHO05D004078 2.3e-06 55.8 67 41.8
MSTRG.25910 Avicennia marina HOM05D005233 ORTHO05D006308 6.6e-06 54.3 24 95.8
Ciclev10001136m.g Citrus clementina HOM05D000189 ORTHO05D004078 8.6e-06 53.9 67 40.3
Psat7g044560 Pisum sativum HOM05D000189 ORTHO05D004078 8.6e-06 53.9 66 39.4


User provided reference genes

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