Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 2.0e-71 272.3 137 100.0
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 8.8e-35 150.6 139 59.7
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 4.7e-28 128.3 140 56.4
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 4.7e-28 128.3 140 56.4
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 2.5e-21 105.9 142 47.2
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 6.1e-20 101.3 134 49.3
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 6.8e-19 97.8 119 48.7
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 9.7e-18 94.0 136 44.9
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 1.8e-16 89.7 118 48.3
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 3.1e-16 89.0 138 44.2
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 3.1e-16 89.0 129 45.7
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 3.1e-16 89.0 118 47.5
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 4.1e-16 88.6 131 46.6
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 5.3e-16 88.2 118 47.5
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 7.0e-16 87.8 133 42.1
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 7.0e-16 87.8 130 45.4
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 9.1e-16 87.4 145 46.2
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 1.2e-15 87.0 135 45.2
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.7e-15 85.9 131 45.8
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 7.7e-15 84.3 130 45.4
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 1.3e-14 83.6 135 41.5
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.3e-14 83.6 135 42.2
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 1.7e-14 83.2 125 40.8
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.0e-14 81.6 135 41.5
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.0e-14 81.6 135 41.5
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 1.9e-13 79.7 139 42.4
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 2.5e-13 79.3 124 41.9
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 3.2e-13 79.0 135 44.4
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 4.2e-13 78.6 127 44.1
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 7.2e-13 77.8 140 42.9
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 7.2e-13 77.8 132 41.7
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 9.4e-13 77.4 132 42.4
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 1.2e-12 77.0 128 41.4
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.6e-12 76.6 136 43.4
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 2.1e-12 76.3 130 43.1
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 2.1e-12 76.3 130 42.3
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 2.1e-12 76.3 135 43.7
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 2.1e-12 76.3 146 41.1
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 6.1e-12 74.7 139 39.6
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 6.1e-12 74.7 139 41.7
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 8.0e-12 74.3 133 42.9
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 1.0e-11 73.9 132 37.9
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 4.0e-11 72.0 133 42.9
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 6.8e-11 71.2 116 40.5
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 8.8e-11 70.9 135 42.2
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 1.5e-10 70.1 133 42.9
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 1.5e-10 70.1 131 42.7
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 2.6e-10 69.3 135 39.3
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 2.6e-10 69.3 135 39.3
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 2.6e-10 69.3 137 42.3
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 2.6e-10 69.3 133 41.4
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 3.4e-10 68.9 138 39.9
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 3.4e-10 68.9 136 38.2
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 7.5e-10 67.8 133 38.3
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 1.3e-09 67.0 135 41.5
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 2.8e-09 65.9 144 39.6
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 2.8e-09 65.9 135 40.7
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 4.8e-09 65.1 135 41.5
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 4.8e-09 65.1 132 36.4
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 6.3e-09 64.7 139 38.8
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 2.4e-08 62.8 130 38.5
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 2.0e-07 59.7 141 36.9
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 3.5e-07 58.9 63 50.8
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 5.9e-07 58.2 136 37.5
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 2.9e-06 55.8 121 35.5
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 2.9e-06 55.8 144 36.8
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 5.0e-06 55.1 141 33.3


User provided reference genes

Program Settings