Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 0.0e+00 1263.4 628 100.0
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.1e-305 1052.7 622 82.2
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 7.0e-305 1050.0 622 81.8
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.2e-299 1032.7 624 79.6
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 4.7e-285 984.2 626 76.2
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 4.3e-278 961.1 605 78.0
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 2.8e-277 958.4 623 74.0
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 6.2e-277 957.2 625 75.2
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.7e-274 949.1 629 73.4
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 3.8e-274 948.0 627 73.4
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 1.4e-273 946.0 627 73.0
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 3.2e-273 944.9 627 73.7
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.1e-273 944.5 625 73.9
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.6e-272 942.6 627 72.1
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.1e-272 942.2 605 75.9
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.1e-272 942.2 627 72.1
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 2.1e-272 942.2 627 73.2
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.7e-272 941.8 627 71.9
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.7e-272 941.8 627 73.2
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.0e-271 939.9 627 72.4
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 2.3e-271 938.7 628 73.1
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.9e-271 937.9 627 73.0
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 3.3e-270 934.9 627 73.2
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 2.1e-269 932.2 621 72.5
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 4.4e-267 924.5 670 68.4
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.3e-266 922.9 631 71.8
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.4e-265 919.5 656 70.4
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 4.2e-265 917.9 628 71.8
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 5.4e-265 917.5 631 70.8
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 6.0e-264 914.1 606 73.6
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 4.3e-262 907.9 622 70.7
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 4.3e-262 907.9 627 69.4
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 5.6e-262 907.5 620 69.5
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 6.2e-261 904.0 634 68.8
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 8.1e-261 903.7 621 69.1
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.1e-260 903.3 635 69.4
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.4e-260 902.9 627 71.0
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 2.6e-259 898.7 620 70.3
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 3.4e-259 898.3 628 68.6
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 3.4e-259 898.3 665 68.6
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 9.9e-259 896.7 622 69.5
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.3e-258 896.3 627 69.7
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.2e-258 895.6 628 69.7
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.4e-257 892.1 608 71.9
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 4.2e-257 891.3 620 69.0
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.2e-256 889.8 628 69.3
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.6e-256 889.4 630 68.9
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 1.6e-256 889.4 633 69.4
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 7.9e-256 887.1 628 69.7
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 7.9e-256 887.1 621 67.8
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.3e-255 886.3 628 69.1
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.3e-255 886.3 643 68.3
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 1.8e-255 885.9 633 69.0
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.8e-255 885.9 630 71.0
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.5e-254 882.9 626 67.4
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.9e-254 882.5 621 69.1
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 5.6e-254 880.9 631 68.1
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 9.6e-254 880.2 620 67.7
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 6.2e-253 877.5 598 71.1
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.8e-252 875.9 623 67.1
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 4.2e-249 864.8 573 72.1
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 5.5e-249 864.4 583 72.9
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 4.6e-248 861.3 628 68.2
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 1.0e-247 860.1 630 67.5
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 4.3e-246 854.7 571 72.7
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 5.6e-246 854.4 624 68.6
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 3.1e-244 848.6 611 68.2
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 9.0e-244 847.0 595 70.4
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.3e-242 843.2 625 64.5
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 7.1e-241 837.4 623 65.3
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.2e-240 836.6 622 67.0
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 3.5e-240 835.1 630 66.2
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 4.6e-240 834.7 625 64.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 5.1e-239 831.2 624 65.7
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.3e-237 826.6 596 68.5
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.6e-237 826.2 626 63.6
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.8e-237 824.7 591 68.7
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 8.2e-237 823.9 631 64.7
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 3.4e-235 818.5 632 64.9
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.9e-234 815.5 632 62.8
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 9.3e-233 810.4 628 63.5
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 6.7e-231 804.3 625 62.9
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 3.3e-230 802.0 625 62.9
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 4.8e-229 798.1 627 63.0
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 4.8e-229 798.1 627 63.0
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.2e-227 793.5 625 62.4
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 1.5e-227 793.1 627 64.1
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 6.5e-218 761.1 564 64.9
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 5.9e-211 738.0 631 58.5
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 2.5e-209 732.6 627 57.9
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 7.2e-201 704.5 440 77.7
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 6.8e-191 671.4 454 71.8
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 2.9e-186 656.0 626 51.6
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 5.2e-183 645.2 486 64.8
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 6.0e-179 631.7 450 69.1
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 2.1e-176 623.2 639 49.6
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.4e-172 610.5 416 71.6
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 3.0e-162 576.2 398 69.8
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 1.7e-154 550.4 603 46.9
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.2e-150 537.7 631 46.0
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.3e-145 519.6 418 64.4
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.4e-141 505.4 400 62.5
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 2.7e-123 446.8 421 57.7
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 3.5e-123 446.4 607 43.0
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.0e-109 401.7 765 33.5
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.7e-102 375.6 271 68.6
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.2e-49 202.2 175 55.4
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 7.1e-47 193.0 166 56.0
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-40 172.2 163 54.6
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 1.9e-39 168.3 214 41.1
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.2e-39 167.2 152 53.9
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.2e-30 139.0 78 80.8
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 3.2e-23 114.4 213 35.7
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.4e-18 99.0 88 58.0
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 6.5e-16 90.1 80 55.0
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.7e-08 65.5 40 75.0
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 2.5e-07 61.6 47 59.6
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 3.2e-07 61.2 35 77.1
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 6.1e-06 57.0 217 24.0


User provided reference genes

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