Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.3e-73 279.6 147 100.0
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 6.1e-50 201.1 145 74.5
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 4.1e-46 188.3 145 71.0
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 1.5e-45 186.4 148 70.9
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.8e-44 181.8 146 69.9
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 8.8e-41 170.6 145 62.8
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 4.8e-39 164.9 148 61.5
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 4.8e-39 164.9 147 62.6
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 6.3e-39 164.5 149 61.1
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 6.3e-39 164.5 148 61.5
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 1.1e-38 163.7 142 63.4
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.6e-37 159.8 145 64.8
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.0e-37 159.5 145 64.8
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 2.0e-37 159.5 149 61.7
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 2.6e-37 159.1 145 64.8
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.3e-36 156.8 147 57.8
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 2.2e-36 156.0 147 62.6
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 2.2e-36 156.0 147 61.2
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 2.2e-36 156.0 111 74.8
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.2e-36 156.0 147 57.8
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 2.9e-36 155.6 147 61.9
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 2.9e-36 155.6 145 63.4
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 3.8e-36 155.2 146 60.3
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 6.5e-36 154.5 147 61.2
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 8.5e-36 154.1 147 57.1
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.5e-35 153.3 151 60.9
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 7.2e-35 151.0 138 62.3
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 9.4e-35 150.6 141 58.9
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 2.1e-34 149.4 146 62.3
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.1e-34 149.4 142 60.6
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 2.7e-34 149.1 125 63.2
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 8.0e-34 147.5 142 59.9
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.0e-33 147.1 138 61.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 3.0e-33 145.6 140 55.7
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 3.0e-33 145.6 147 56.5
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 6.7e-33 144.4 145 55.9
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 1.5e-32 143.3 144 57.6
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 2.0e-32 142.9 133 61.7
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 2.0e-32 142.9 140 60.0
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 2.0e-32 142.9 140 57.9
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 2.6e-32 142.5 138 58.7
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 3.3e-32 142.1 112 67.0
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 3.3e-32 142.1 143 59.4
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 9.7e-32 140.6 142 59.2
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 1.3e-31 140.2 137 57.7
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.3e-31 140.2 136 60.3
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.2e-31 139.4 100 70.0
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 4.8e-31 138.3 121 62.0
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 6.3e-31 137.9 145 58.6
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 6.3e-31 137.9 99 71.7
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 6.3e-31 137.9 109 67.0
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 1.4e-30 136.7 122 61.5
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 2.4e-30 136.0 121 62.0
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 2.4e-30 136.0 110 68.2
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 2.4e-30 136.0 107 66.4
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 4.1e-30 135.2 103 69.9
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 4.1e-30 135.2 103 69.9
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 5.3e-30 134.8 112 67.9
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 7.0e-30 134.4 121 62.0
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 7.0e-30 134.4 151 56.3
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 9.1e-30 134.0 120 62.5
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.2e-29 133.7 117 62.4
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 2.0e-29 132.9 121 62.8
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 2.0e-29 132.9 128 60.9
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 2.0e-29 132.9 87 79.3
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 2.7e-29 132.5 121 60.3
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 2.7e-29 132.5 113 62.8
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 2.7e-29 132.5 146 57.5
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 3.5e-29 132.1 131 56.5
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 4.5e-29 131.7 120 61.7
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 4.5e-29 131.7 119 65.5
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 5.9e-29 131.3 142 54.2
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 5.9e-29 131.3 121 62.8
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 7.7e-29 131.0 142 53.5
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 1.0e-28 130.6 128 59.4
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.0e-28 130.6 146 54.8
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.3e-28 130.2 121 60.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 1.7e-28 129.8 119 61.3
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 5.0e-28 128.3 158 53.2
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 6.5e-28 127.9 127 56.7
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 6.5e-28 127.9 120 60.8
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 6.5e-28 127.9 119 60.5
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 6.5e-28 127.9 144 55.6
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 8.5e-28 127.5 109 63.3
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 7.2e-27 124.4 84 76.2
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 6.8e-25 117.9 131 49.6
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 1.5e-24 116.7 156 49.4
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 3.4e-24 115.5 72 80.6
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 4.4e-24 115.2 93 64.5
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 5.7e-24 114.8 74 79.7
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 1.3e-23 113.6 156 51.3
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.3e-23 113.6 158 49.4
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.7e-23 113.2 86 68.6
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 6.3e-23 111.3 106 58.5
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.1e-22 110.5 136 52.2
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.1e-22 110.5 128 50.8
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 1.4e-22 110.2 76 75.0
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 7.0e-22 107.8 109 54.1
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.5e-19 100.1 129 47.3
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.6e-18 96.7 71 73.2
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 6.1e-18 94.7 80 58.8
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.0e-17 94.0 137 46.0
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 2.3e-17 92.8 66 71.2
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 5.2e-17 91.7 68 70.6
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.2e-13 80.5 74 52.7
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.6e-13 80.1 98 48.0
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 4.5e-13 78.6 49 75.5
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.7e-12 76.6 57 64.9
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 3.1e-09 65.9 101 45.5


User provided reference genes

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