Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 7.9e-76 287.0 138 100.0
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 6.3e-33 144.4 139 59.0
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 1.6e-31 139.8 136 52.2
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 9.8e-26 120.6 142 50.7
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 2.3e-22 109.4 141 48.2
SalBow8G4409 Salvia bowleyana HOM05D007558 ORTHO05D009245 5.6e-21 104.8 144 45.1
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 6.1e-20 101.3 122 48.4
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 4.0e-19 98.6 118 48.3
MSTRG.591 Avicennia marina HOM05D007558 ORTHO05D009245 8.9e-19 97.4 99 54.5
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 8.9e-19 97.4 129 45.7
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 5.8e-18 94.7 130 44.6
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 1.2e-15 87.0 120 45.8
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 1.5e-13 80.1 134 41.0
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 4.3e-13 78.6 123 42.3
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 7.3e-13 77.8 109 47.7
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 7.3e-13 77.8 146 37.0
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 1.2e-12 77.0 137 40.1
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 1.6e-12 76.6 102 45.1
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 2.1e-12 76.3 109 47.7
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 3.6e-12 75.5 122 38.5
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 3.6e-12 75.5 108 47.2
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 3.6e-12 75.5 92 51.1
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 4.7e-12 75.1 132 37.9
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 6.2e-12 74.7 105 44.8
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 6.2e-12 74.7 115 47.0
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 6.2e-12 74.7 132 38.6
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 6.2e-12 74.7 122 37.7
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 1.4e-11 73.6 124 37.9
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 1.8e-11 73.2 114 43.9
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 2.3e-11 72.8 134 38.8
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 4.0e-11 72.0 117 41.0
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 4.0e-11 72.0 112 42.0
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 4.0e-11 72.0 135 37.8
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 5.2e-11 71.6 116 37.1
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 5.2e-11 71.6 108 45.4
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 1.2e-10 70.5 125 41.6
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 1.2e-10 70.5 118 39.0
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 1.5e-10 70.1 133 37.6
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 2.0e-10 69.7 112 41.1
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 2.0e-10 69.7 124 39.5
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 3.4e-10 68.9 124 41.1
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 7.5e-10 67.8 128 36.7
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 7.5e-10 67.8 128 36.7
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 7.5e-10 67.8 128 36.7
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 1.7e-09 66.6 135 34.1
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 1.7e-09 66.6 112 42.0
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 2.2e-09 66.2 136 37.5
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 2.9e-09 65.9 116 45.7
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 2.9e-09 65.9 93 40.9
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 4.9e-09 65.1 125 36.0
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 6.4e-09 64.7 104 46.2
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 1.1e-08 63.9 142 33.8
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.1e-08 63.9 116 37.9
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 1.4e-08 63.5 118 35.6
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 1.9e-08 63.2 109 38.5
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 2.4e-08 62.8 101 40.6
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 3.2e-08 62.4 141 33.3
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 3.2e-08 62.4 118 35.6
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 4.1e-08 62.0 103 43.7
unitig_8.g3942 Utricularia gibba HOM05D007558 ORTHO05D009245 4.1e-08 62.0 135 37.8
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 5.4e-08 61.6 109 40.4
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 5.4e-08 61.6 113 36.3
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 9.2e-08 60.8 115 37.4
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 1.2e-07 60.5 100 44.0
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 1.2e-07 60.5 121 34.7
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 1.6e-07 60.1 124 33.1
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 3.5e-07 58.9 119 37.0
Nitab4.5_0005678g0020 Nicotiana tabacum HOM05D020724 ORTHO05D025910 4.6e-07 58.5 115 38.3
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 4.6e-07 58.5 104 37.5
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 6.0e-07 58.2 182 29.1
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 6.0e-07 58.2 115 38.3
SGA_v2.0_scaffold165G38235 Striga asiatica HOM05D007558 ORTHO05D009245 6.0e-07 58.2 124 37.1
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 7.8e-07 57.8 64 53.1
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 1.3e-06 57.0 63 50.8
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 1.7e-06 56.6 148 33.8
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.0e-06 55.8 115 36.5
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 5.1e-06 55.1 179 28.5
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 5.1e-06 55.1 142 32.4
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 5.1e-06 55.1 146 32.9
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 8.6e-06 54.3 116 35.3
Nitab4.5_0000203g0180 Nicotiana tabacum HOM05D020724 ORTHO05D025910 8.6e-06 54.3 111 37.8
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 8.6e-06 54.3 111 36.0


User provided reference genes

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