Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 0.0e+00 1363.6 701 100.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 3.2e-298 1028.1 700 76.1
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 2.1e-281 972.2 702 72.4
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 1.1e-263 913.3 715 69.8
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 2.9e-259 898.7 717 67.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 5.0e-259 897.9 724 67.5
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.7e-251 872.8 724 66.4
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 2.0e-247 859.4 718 66.0
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 2.6e-247 859.0 733 66.0
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 4.4e-247 858.2 721 65.5
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 6.3e-246 854.4 731 65.0
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.1e-245 853.6 733 64.5
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.4e-245 853.2 714 65.8
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 2.4e-245 852.4 712 65.2
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 9.1e-245 850.5 712 65.0
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.0e-244 849.4 708 65.5
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 5.9e-244 847.8 735 65.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.7e-243 846.3 719 64.3
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 8.5e-243 844.0 727 64.2
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.1e-242 843.6 712 64.5
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.2e-242 842.0 707 66.9
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 3.2e-242 842.0 722 65.7
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 4.2e-242 841.6 711 64.6
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 5.5e-242 841.3 711 65.0
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.6e-241 839.7 733 65.1
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 2.1e-241 839.3 712 64.7
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 2.1e-241 839.3 723 65.0
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 2.7e-241 839.0 703 64.6
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 6.7e-240 834.3 714 65.1
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 6.7e-240 834.3 710 65.1
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 8.8e-240 833.9 711 64.4
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.5e-239 833.2 717 64.6
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.5e-239 833.2 714 65.0
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 2.0e-239 832.8 712 66.6
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 4.4e-239 831.6 715 64.5
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 5.7e-239 831.2 715 64.6
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 5.7e-239 831.2 713 64.4
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 9.7e-239 830.5 722 63.3
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 9.7e-239 830.5 714 64.7
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 1.3e-238 830.1 718 63.8
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.8e-238 828.9 717 64.3
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 1.1e-237 827.0 705 65.4
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.4e-237 826.6 714 64.4
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.5e-236 822.0 724 64.5
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.2e-235 819.3 713 62.8
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.9e-235 818.9 729 63.5
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 8.5e-235 817.4 728 62.6
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.7e-233 812.4 722 62.2
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 2.7e-233 812.4 714 62.6
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.4e-232 810.1 721 63.0
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.6e-231 805.8 710 64.2
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 7.5e-231 804.3 709 63.2
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 9.8e-231 803.9 716 63.4
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.3e-230 803.5 702 64.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.3e-230 801.2 702 64.4
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 8.3e-230 800.8 706 64.2
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 3.1e-229 798.9 726 61.4
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 7.0e-229 797.7 699 63.9
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 5.9e-228 794.7 721 61.7
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 2.3e-227 792.7 731 62.5
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 2.9e-227 792.3 731 61.8
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.2e-226 788.5 726 62.0
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 4.2e-226 788.5 940 51.8
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 5.5e-226 788.1 798 57.4
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 5.5e-226 788.1 719 62.9
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 7.2e-226 787.7 703 63.6
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.2e-225 786.9 720 62.9
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 4.7e-225 785.0 715 62.7
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 2.3e-224 782.7 701 63.5
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 3.0e-224 782.3 695 63.5
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 3.0e-224 782.3 722 61.1
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 5.7e-223 778.1 720 60.7
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 7.0e-221 771.2 730 60.5
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 2.3e-219 766.1 722 61.1
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 1.6e-217 760.0 635 64.6
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.6e-217 760.0 724 59.3
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.7e-214 750.0 728 60.0
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.2e-212 743.8 713 57.5
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 4.7e-209 731.9 925 49.5
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.9e-205 719.9 724 56.6
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.2e-204 717.2 722 57.6
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 2.7e-204 716.1 772 55.1
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 2.7e-204 716.1 720 56.4
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.5e-202 710.3 714 56.9
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.1e-200 704.1 729 56.5
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 2.3e-200 703.0 724 56.8
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 8.9e-200 701.0 594 64.3
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.2e-199 700.7 716 55.6
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.3e-198 697.2 719 55.1
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 4.9e-198 695.3 716 55.2
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 5.4e-197 691.8 723 54.8
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 7.1e-197 691.4 718 55.2
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 3.0e-195 686.0 721 55.5
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 3.3e-194 682.6 740 53.4
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 2.8e-193 679.5 717 54.5
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.1e-192 677.6 565 66.7
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.3e-185 654.1 620 59.7
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 3.6e-185 652.5 576 63.4
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.3e-182 644.0 615 59.2
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 2.2e-182 643.3 553 64.9
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 9.0e-168 594.7 701 52.5
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 1.2e-167 594.3 596 58.6
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 1.0e-158 564.7 535 59.4
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 6.1e-156 555.4 597 53.8
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 7.4e-138 495.4 518 56.4
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 1.2e-132 478.0 767 40.2
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.0e-131 474.9 786 39.8
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.7e-113 414.5 708 37.4
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 4.0e-107 393.3 291 72.2
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.6e-95 354.8 270 68.9
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 8.3e-89 332.4 468 48.1
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 2.7e-87 327.4 439 47.2
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 3.2e-72 277.3 438 42.5
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 7.8e-71 272.7 300 55.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 4.0e-59 233.8 277 48.7
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 9.0e-59 232.6 370 43.2
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.1e-56 225.7 191 61.8
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 2.8e-52 211.1 182 62.1
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 9.6e-45 186.0 153 68.0
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.4e-43 182.2 156 59.6
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 5.7e-37 160.2 126 73.8
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.3e-33 149.1 126 62.7
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 3.2e-32 144.4 133 64.7
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 8.8e-30 136.3 108 71.3
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 8.8e-30 136.3 97 70.1
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 5.3e-27 127.1 143 51.7
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 9.7e-21 106.3 109 50.5
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 4.8e-20 104.0 144 46.5
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 1.1e-08 66.2 137 35.0
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 2.7e-07 61.6 108 38.9
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 3.6e-07 61.2 71 52.1
Pp3c10_21900 Physcomitrium patens HOM05D003178 ORTHO05D003636 8.8e-06 56.6 141 28.4


User provided reference genes

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