Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.0e-77 293.5 164 100.0
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 2.1e-59 232.6 157 80.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 3.6e-59 231.9 158 81.0
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 3.6e-59 231.9 155 82.6
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 8.0e-59 230.7 155 81.3
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.5e-57 226.5 161 78.9
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.6e-57 225.7 151 81.5
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.6e-57 225.7 153 83.0
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.6e-57 225.7 153 83.0
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 2.6e-57 225.7 159 79.9
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 4.4e-57 224.9 154 80.5
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 4.4e-57 224.9 152 78.9
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 9.8e-57 223.8 155 81.3
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 9.8e-57 223.8 159 78.0
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 2.2e-56 222.6 152 80.3
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.8e-56 222.2 151 80.1
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 4.8e-56 221.5 147 79.6
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 8.3e-56 220.7 151 78.1
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 1.1e-55 220.3 147 79.6
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.1e-55 220.3 159 78.0
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.4e-55 219.9 160 77.5
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.4e-55 219.9 152 78.9
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 4.1e-55 218.4 150 78.0
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 1.2e-54 216.9 152 76.3
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.0e-54 216.1 150 76.7
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 2.7e-54 215.7 150 76.7
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 3.5e-54 215.3 149 79.2
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 4.5e-54 214.9 150 78.7
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 5.9e-54 214.5 150 77.3
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 7.7e-54 214.2 152 76.3
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.0e-53 213.8 155 76.8
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 2.3e-53 212.6 149 77.2
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 2.9e-53 212.2 147 76.2
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.8e-53 211.8 158 77.8
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 5.0e-53 211.5 149 76.5
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.0e-53 211.5 149 76.5
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 2.5e-52 209.1 149 75.2
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.5e-52 209.1 149 75.2
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.3e-52 208.8 149 75.2
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.3e-52 208.8 149 75.2
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.3e-52 208.8 149 77.9
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.2e-52 208.4 152 73.7
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.2e-51 206.8 150 73.3
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.2e-51 206.8 148 75.7
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 2.1e-51 206.1 151 75.5
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 6.1e-51 204.5 144 77.1
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 8.0e-51 204.1 175 68.6
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 5.2e-50 201.4 144 75.0
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 5.2e-50 201.4 144 75.0
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 5.2e-50 201.4 146 74.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 5.2e-50 201.4 146 74.7
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 6.8e-50 201.1 150 72.7
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 3.4e-49 198.7 151 72.8
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 3.4e-49 198.7 148 73.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 5.7e-49 198.0 146 72.6
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 9.8e-49 197.2 131 81.7
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 1.7e-48 196.4 156 68.6
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 2.8e-48 195.7 146 73.3
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 6.3e-48 194.5 143 73.4
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 6.3e-48 194.5 144 72.2
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.1e-47 193.7 143 73.4
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.8e-47 193.0 145 73.1
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 2.4e-47 192.6 151 69.5
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 5.4e-47 191.4 150 71.3
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 7.0e-47 191.0 144 71.5
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 7.0e-47 191.0 144 70.8
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 7.0e-47 191.0 144 71.5
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 9.2e-47 190.7 146 69.2
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 9.2e-47 190.7 148 70.3
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.2e-46 190.3 153 73.2
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.2e-46 190.3 143 72.0
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 2.0e-46 189.5 144 70.8
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 2.0e-46 189.5 144 70.1
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 2.0e-46 189.5 144 70.1
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 2.0e-46 189.5 144 70.8
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.0e-46 189.5 140 72.1
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 2.0e-46 189.5 144 70.8
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.0e-46 189.5 143 71.3
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 2.7e-46 189.1 154 67.5
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 3.5e-46 188.7 144 71.5
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 4.5e-46 188.3 144 70.1
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 4.5e-46 188.3 144 70.1
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 5.9e-46 188.0 144 70.1
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.9e-46 188.0 144 70.1
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 2.9e-45 185.7 144 70.1
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 4.3e-44 181.8 144 69.4
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 5.6e-44 181.4 147 69.4
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 1.2e-43 180.3 146 68.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.2e-43 180.3 230 53.5
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 2.1e-43 179.5 140 67.9
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 4.0e-42 175.3 150 66.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 5.8e-41 171.4 150 66.0
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 7.5e-41 171.0 145 66.9
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 6.4e-40 167.9 151 64.9
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 5.4e-39 164.9 152 64.5
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 7.0e-39 164.5 111 79.3
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 3.5e-38 162.2 114 77.2
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.0e-37 160.6 112 79.5
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.3e-37 159.5 144 61.8
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 3.0e-37 159.1 144 61.8
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 3.9e-37 158.7 152 61.2
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.6e-35 153.3 109 77.1
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 3.6e-35 152.1 123 71.5
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.3e-34 149.4 150 60.7
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 8.9e-34 147.5 145 53.8
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.0e-33 146.4 158 57.6
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 9.8e-33 144.1 112 71.4
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 6.4e-32 141.4 149 57.0
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 5.4e-31 138.3 112 70.5
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 6.0e-30 134.8 137 51.1
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 7.8e-30 134.4 170 52.4
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 6.6e-29 131.3 157 53.5
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 6.6e-29 131.3 138 47.1
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.5e-28 130.2 101 67.3
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 4.3e-28 128.6 104 66.3
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 2.8e-27 125.9 158 51.9
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.1e-26 124.0 92 73.9
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.5e-25 120.2 150 52.0
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 3.4e-25 119.0 158 50.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 7.5e-25 117.9 151 51.0
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 8.6e-21 104.4 81 71.6
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 2.8e-19 99.4 125 51.2
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 7.1e-15 84.7 66 66.7
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 5.6e-12 75.1 144 36.8
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 9.6e-12 74.3 46 82.6
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.0e-09 66.6 128 39.8
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 4.4e-09 65.5 51 62.7
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 8.4e-08 61.2 42 73.8
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 4.2e-07 58.9 133 30.1
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 3.5e-06 55.8 42 64.3


User provided reference genes

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