Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 0.0e+00 2345.5 1248 100.0
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 0.0e+00 1353.6 1183 63.6
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 0.0e+00 1321.2 1186 59.9
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 0.0e+00 1209.9 1202 55.5
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 0.0e+00 1195.3 1198 55.5
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 0.0e+00 1191.8 1188 55.6
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 0.0e+00 1187.6 1185 55.3
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1166.8 1187 56.4
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1163.3 1187 56.3
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1159.8 1171 55.2
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1154.8 1181 55.5
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1154.4 1189 55.1
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1154.4 1207 54.8
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 0.0e+00 1153.3 1243 53.5
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1142.1 1199 55.0
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1141.7 1180 55.3
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1140.2 1196 53.8
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1137.9 1198 54.4
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1132.9 1180 54.8
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1131.7 1200 53.6
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1129.8 1241 52.8
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 0.0e+00 1129.4 1188 54.5
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 0.0e+00 1128.6 1187 55.0
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1127.5 1200 53.4
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1125.9 1187 54.7
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1120.5 1252 51.8
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1119.8 1189 53.1
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1109.7 1200 53.1
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 0.0e+00 1106.3 1200 53.8
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1105.5 1188 53.7
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 0.0e+00 1105.1 1187 53.6
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 0.0e+00 1103.2 1193 52.3
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 0.0e+00 1099.3 1181 53.0
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 0.0e+00 1098.2 1185 52.9
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 0.0e+00 1097.4 1180 52.6
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 1094.0 1189 52.5
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 0.0e+00 1092.0 1197 53.4
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 0.0e+00 1088.6 1176 52.6
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 0.0e+00 1085.1 1198 53.0
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 0.0e+00 1084.3 1093 57.3
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 0.0e+00 1083.6 1182 52.5
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1080.1 1185 52.7
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 8.5e-312 1073.9 1181 52.4
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 3.4e-311 1072.0 1185 52.5
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 6.0e-311 1071.2 1190 51.2
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 4.2e-309 1065.1 1240 49.7
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 9.3e-309 1063.9 1189 51.4
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 2.7e-308 1062.4 1190 51.3
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 3.5e-308 1062.0 1189 51.3
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 9.6e-306 1053.9 1188 51.1
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 9.0e-304 1047.3 1203 50.5
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 1.0e-302 1043.9 1198 51.2
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 8.5e-302 1040.8 1184 51.9
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 2.3e-299 1032.7 1195 49.6
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 2.8e-297 1025.8 1121 53.2
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 3.1e-296 1022.3 1181 50.0
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 1.5e-295 1020.0 1174 50.3
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 6.5e-294 1014.6 1019 57.2
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 1.9e-293 1013.1 1199 49.5
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 2.5e-293 1012.7 1251 48.4
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 1.0e-291 1007.3 1188 49.9
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 1.4e-291 1006.9 1134 51.1
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 3.0e-291 1005.7 1187 49.7
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 1.5e-290 1003.4 1188 49.5
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 4.4e-290 1001.9 1265 48.4
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 3.7e-289 998.8 1193 49.4
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.4e-288 996.9 1193 50.2
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 1.5e-287 993.4 1188 49.8
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 2.1e-284 983.0 1187 49.5
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.7e-284 981.9 1193 50.2
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 6.3e-281 971.5 1210 48.7
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 8.2e-281 971.1 1187 48.1
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 1.3e-273 947.2 1214 47.7
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 6.1e-260 901.7 1204 45.9
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 6.8e-259 898.3 1182 45.7
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 3.5e-255 885.9 1059 49.1
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 1.1e-253 880.9 1081 49.9
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 4.7e-252 875.5 753 63.6
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.3e-246 857.4 1118 47.7
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 7.0e-240 835.1 1250 43.4
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 9.2e-240 834.7 1029 49.6
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 1.1e-227 794.7 1194 44.2
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 1.5e-221 774.2 746 57.2
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 7.3e-213 745.3 1174 41.2
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 8.4e-209 731.9 1164 41.7
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 5.4e-208 729.2 1188 39.9
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 5.6e-197 692.6 1167 40.3
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 3.4e-194 683.3 739 52.4
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 1.2e-186 658.3 985 42.6
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 1.5e-170 604.7 610 53.8
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 1.3e-156 558.5 1220 35.7
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 8.0e-143 512.7 1229 33.6
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 1.9e-131 474.9 1136 33.5
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 4.9e-124 450.3 630 46.3
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 1.2e-106 392.5 387 55.3
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 1.0e-89 336.3 394 48.2
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.4e-78 299.3 515 40.2
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 2.7e-66 258.5 1319 26.4
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 4.6e-66 257.7 447 40.7
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.8e-55 221.9 415 36.9
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 9.4e-35 153.7 107 68.2
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 8.0e-34 150.6 115 60.9
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 4.1e-30 138.3 117 59.0
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 1.9e-27 129.4 115 53.0
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.5e-27 129.0 207 41.1
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 1.4e-25 123.2 78 71.8
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 1.2e-24 120.2 269 33.8
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.2e-24 120.2 86 65.1
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 7.5e-24 117.5 259 34.4
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 9.8e-24 117.1 110 59.1
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 2.0e-21 109.4 103 55.3
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 6.1e-18 97.8 90 48.9
Cre07.g347700 Chlamydomonas reinhardtii HOM05D006963 ORTHO05D141144 1.2e-08 67.0 138 30.4
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.9e-07 62.4 51 54.9
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 9.2e-06 57.4 74 37.8


User provided reference genes

Program Settings