Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 4.7e-208 727.6 371 100.0
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.8e-159 566.2 332 86.7
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 3.4e-150 535.4 331 82.2
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 2.2e-149 532.7 324 83.3
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 5.0e-149 531.6 331 81.0
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 3.5e-147 525.4 332 80.1
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 3.5e-147 525.4 332 80.4
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.8e-146 523.1 332 78.3
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 2.3e-146 522.7 329 79.6
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 6.7e-146 521.2 332 79.2
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 8.7e-146 520.8 329 79.6
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.5e-145 520.0 331 80.1
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.5e-145 520.0 346 77.5
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 4.3e-145 518.5 336 78.6
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.3e-144 516.9 329 78.7
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 9.0e-143 510.8 331 78.9
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 9.0e-143 510.8 331 77.0
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 9.0e-143 510.8 331 78.5
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 7.7e-142 507.7 331 77.9
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.2e-141 506.1 331 77.9
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 3.8e-141 505.4 331 74.9
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 8.5e-141 504.2 331 77.9
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 4.2e-140 501.9 331 77.3
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 1.6e-139 500.0 369 71.0
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 3.6e-139 498.8 329 77.8
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 7.9e-139 497.7 332 76.5
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.0e-138 497.3 344 73.8
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 5.1e-138 495.0 331 74.9
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 5.1e-138 495.0 332 74.7
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 6.7e-138 494.6 331 75.8
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 1.5e-137 493.4 333 74.2
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 2.5e-137 492.7 329 74.8
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 2.5e-137 492.7 331 73.7
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 3.3e-137 492.3 331 75.8
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 4.3e-137 491.9 332 73.8
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 5.7e-137 491.5 332 75.0
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 7.4e-137 491.1 326 75.5
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 9.7e-137 490.7 331 73.4
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.3e-136 490.3 329 75.1
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 1.7e-136 490.0 329 73.3
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 2.2e-136 489.6 331 76.7
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 2.2e-136 489.6 329 73.3
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 1.4e-135 486.9 350 69.7
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 1.8e-135 486.5 331 73.7
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.5e-134 483.4 332 74.4
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 1.5e-134 483.4 332 74.7
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 2.0e-134 483.0 326 74.5
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.0e-134 483.0 326 74.2
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 3.4e-134 482.3 331 74.3
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 4.5e-134 481.9 331 74.6
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 4.5e-134 481.9 330 74.8
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 5.9e-134 481.5 326 74.2
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.0e-133 480.7 330 74.5
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.2e-133 479.6 332 72.9
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 2.2e-133 479.6 332 71.4
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 2.9e-133 479.2 353 71.1
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 3.8e-133 478.8 332 73.2
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 6.5e-133 478.0 332 73.5
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 1.1e-132 477.2 332 72.9
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 1.1e-132 477.2 331 73.7
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.1e-132 477.2 332 73.5
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.9e-132 476.5 332 72.0
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 5.5e-132 474.9 331 72.8
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 7.2e-132 474.6 313 77.3
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 7.2e-132 474.6 329 72.6
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 1.6e-131 473.4 329 72.3
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 1.4e-130 470.3 322 73.9
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 2.3e-130 469.5 331 73.7
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 6.7e-130 468.0 321 73.2
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.1e-129 467.2 331 71.9
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 2.0e-129 466.5 321 73.2
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 7.4e-129 464.5 332 69.6
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.1e-127 460.7 344 68.9
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.4e-127 460.3 343 67.6
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.3e-125 453.8 296 76.0
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 7.2e-124 448.0 334 68.6
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.6e-123 446.8 332 69.6
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 4.7e-123 445.3 390 63.3
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 2.6e-121 439.5 325 68.9
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 6.3e-120 434.9 321 70.4
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.0e-117 425.2 331 67.7
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 9.4e-116 421.0 331 68.6
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 8.0e-115 417.9 282 75.2
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 4.1e-111 405.6 332 65.7
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 6.1e-107 391.7 330 61.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 1.4e-106 390.6 332 62.0
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.4e-106 390.6 248 78.6
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 1.8e-106 390.2 332 61.7
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 3.5e-102 375.9 325 57.8
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.4e-95 354.0 333 54.4
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.9e-92 343.6 194 86.6
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.4e-89 332.8 201 82.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.1e-87 327.8 321 52.6
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 1.0e-85 321.2 242 66.9
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 1.5e-84 317.4 180 88.3
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.6e-84 315.5 325 51.1
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 7.1e-79 298.5 325 47.4
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 5.6e-76 288.9 201 75.1
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 3.8e-72 276.2 306 50.3
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 1.9e-71 273.9 241 62.7
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.0e-69 268.1 370 47.3
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 7.3e-68 261.9 325 43.1
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 6.9e-66 255.4 352 40.6
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 2.4e-63 246.9 153 81.0
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.2e-62 244.6 171 72.5
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 6.9e-50 202.2 126 83.3
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 8.4e-48 195.3 170 52.9
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.5e-44 184.5 305 40.7
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.5e-44 183.7 300 40.7
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 3.7e-43 179.9 329 33.4
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 5.1e-37 159.5 127 65.4
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.6e-30 137.9 84 79.8
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 2.2e-24 117.5 344 28.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.3e-19 101.7 76 61.8
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.4e-12 76.6 69 60.9
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.4e-12 76.6 69 60.9
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.8e-11 73.9 59 61.0


User provided reference genes

Program Settings