Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 9.1e-204 713.4 366 100.0
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 1.8e-151 539.7 368 78.0
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 8.7e-130 467.6 374 67.9
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 6.2e-128 461.5 363 68.9
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 1.1e-127 460.7 338 71.3
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 2.6e-126 456.1 362 68.2
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 5.8e-126 454.9 346 69.9
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 5.8e-126 454.9 369 66.9
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 4.9e-125 451.8 333 71.8
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 4.9e-125 451.8 365 66.6
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 1.1e-124 450.7 311 74.0
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 3.2e-124 449.1 315 73.7
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 2.1e-123 446.4 330 71.2
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 6.0e-123 444.9 356 68.0
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 7.9e-123 444.5 364 67.3
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 1.0e-122 444.1 315 73.0
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 2.3e-122 443.0 360 68.1
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 3.9e-122 442.2 348 69.5
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.5e-121 440.3 363 66.4
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 2.5e-121 439.5 360 66.7
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 5.6e-121 438.3 355 68.5
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 7.4e-121 438.0 364 67.6
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 1.6e-120 436.8 314 71.7
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 2.8e-120 436.0 333 69.7
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 8.1e-120 434.5 303 74.3
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 8.1e-120 434.5 334 69.8
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 1.1e-119 434.1 295 74.9
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 1.4e-119 433.7 317 71.9
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 1.4e-119 433.7 360 66.9
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 2.4e-119 433.0 340 69.1
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 2.4e-119 433.0 333 69.7
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 3.1e-119 432.6 313 72.2
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 3.1e-119 432.6 296 75.3
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 4.0e-119 432.2 365 65.5
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 5.3e-119 431.8 313 71.9
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 5.3e-119 431.8 335 69.9
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 5.3e-119 431.8 360 66.7
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 5.3e-119 431.8 364 66.5
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 9.0e-119 431.0 312 70.5
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 1.5e-118 430.3 294 75.2
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 2.0e-118 429.9 318 69.8
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 4.5e-118 428.7 370 64.6
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 1.3e-117 427.2 321 68.8
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 2.2e-117 426.4 342 67.5
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 2.2e-117 426.4 338 66.6
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 2.9e-117 426.0 317 69.7
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 6.4e-117 424.9 304 72.0
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 8.4e-117 424.5 348 66.1
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 8.4e-117 424.5 334 67.4
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 7.1e-116 421.4 311 69.8
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 9.3e-116 421.0 312 70.8
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 1.6e-115 420.2 314 70.1
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 1.0e-114 417.5 284 75.0
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 1.8e-114 416.8 329 68.4
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 2.3e-114 416.4 314 70.1
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 2.3e-114 416.4 318 67.6
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 3.0e-114 416.0 337 66.8
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 8.7e-114 414.5 356 62.9
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 3.3e-113 412.5 314 69.7
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 4.3e-113 412.1 384 62.5
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 4.3e-113 412.1 362 61.3
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 7.4e-113 411.4 294 71.8
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 1.3e-112 410.6 324 67.3
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 2.1e-112 409.8 332 65.4
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 3.7e-112 409.1 324 67.6
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 6.2e-112 408.3 276 78.3
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 3.1e-111 406.0 326 66.6
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 3.1e-111 406.0 314 68.8
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 4.0e-111 405.6 326 66.6
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 4.0e-111 405.6 326 66.6
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 5.3e-111 405.2 400 59.5
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 1.5e-110 403.7 297 72.1
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 1.5e-110 403.7 331 65.0
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 1.0e-109 401.0 387 58.7
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 8.4e-109 397.9 328 63.4
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 3.2e-108 396.0 316 64.6
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 1.2e-107 394.0 309 66.7
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 3.5e-107 392.5 277 74.4
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.8e-106 390.2 267 73.0
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 2.3e-106 389.8 345 62.0
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 4.3e-105 385.6 258 77.1
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.3e-104 384.0 298 68.5
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 2.8e-104 382.9 333 61.3
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 4.8e-104 382.1 284 66.9
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 2.1e-99 366.7 359 60.7
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 1.8e-98 363.6 504 44.0
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 4.3e-97 359.0 263 68.1
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 1.0e-93 347.8 421 52.5
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 1.3e-93 347.4 531 41.4
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 1.7e-93 347.1 306 63.7
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 1.7e-93 347.1 274 70.4
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 5.5e-92 342.0 526 42.4
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 7.4e-89 331.6 301 56.1
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 1.7e-88 330.5 226 74.3
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 1.1e-87 327.8 280 64.6
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 1.3e-85 320.9 304 54.9
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 3.8e-85 319.3 288 56.6
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 6.5e-85 318.5 287 58.5
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 6.5e-85 318.5 226 69.9
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 6.7e-82 308.5 314 51.3
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 1.9e-76 290.4 184 77.2
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 3.0e-74 283.1 398 48.7
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 5.2e-58 229.2 199 58.3
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 1.7e-56 224.2 142 76.8
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 8.3e-56 221.9 213 56.8
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 1.1e-55 221.5 309 42.4
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 1.7e-53 214.2 201 60.2
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 3.8e-53 213.0 170 62.9
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 4.0e-50 203.0 308 39.9
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 2.2e-48 197.2 236 50.0
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 6.4e-48 195.7 204 49.5
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 7.5e-41 172.2 192 51.6
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 2.0e-33 147.5 210 42.4
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 1.9e-28 131.0 209 39.2
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 1.4e-26 124.8 91 74.7
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 6.8e-26 122.5 101 64.4
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 2.2e-24 117.5 109 56.9
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 3.8e-24 116.7 107 57.0
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 1.1e-18 98.6 84 64.3
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.8e-18 97.8 133 45.9
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 3.4e-17 93.6 64 71.9
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 1.2e-14 85.1 87 49.4
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 6.6e-13 79.3 150 32.0
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 2.5e-12 77.4 105 49.5
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 4.3e-12 76.6 64 56.2
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.3e-08 65.1 57 64.9
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-08 64.7 57 64.9
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-08 64.7 57 64.9
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-08 64.7 57 64.9
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.7e-08 64.7 57 64.9
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.2e-08 64.3 57 64.9
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.9e-08 63.9 86 51.2
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.4e-08 62.8 57 63.2


User provided reference genes

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