Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 0.0e+00 1100.9 559 100.0
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 1.0e-206 723.8 557 67.5
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 5.8e-186 654.8 554 62.3
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 8.4e-185 651.0 553 62.0
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 6.5e-177 624.8 559 59.6
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 2.2e-172 609.8 564 58.2
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.1e-171 605.9 540 59.8
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 9.1e-171 604.4 563 57.9
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.2e-170 604.0 533 60.8
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 2.0e-170 603.2 553 57.7
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 3.4e-170 602.4 566 57.4
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 1.0e-169 600.9 563 57.4
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 2.2e-169 599.7 552 58.7
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 2.7e-167 592.8 541 57.7
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 3.6e-167 592.4 542 57.7
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 4.7e-167 592.0 566 56.9
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.5e-165 587.0 549 57.7
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.0e-165 586.6 564 56.7
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 3.3e-165 585.9 566 55.7
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 1.7e-164 583.6 564 57.1
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.1e-163 580.9 612 53.1
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 7.0e-163 578.2 623 53.6
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 9.1e-163 577.8 587 56.9
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 5.0e-161 572.0 533 57.2
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.4e-160 570.5 573 55.8
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.4e-160 570.5 532 56.2
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 4.2e-160 568.9 533 56.8
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 7.2e-160 568.2 529 57.1
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.4e-158 563.9 542 56.1
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 7.4e-157 558.1 534 57.1
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 9.7e-157 557.8 563 53.1
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 9.7e-157 557.8 551 55.7
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 9.7e-157 557.8 542 55.2
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 2.2e-156 556.6 527 56.4
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 2.2e-156 556.6 547 55.0
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 2.2e-156 556.6 560 54.1
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 2.8e-156 556.2 560 54.1
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 2.8e-156 556.2 546 53.7
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.8e-156 556.2 534 55.8
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 4.8e-156 555.4 525 56.6
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.1e-155 554.3 541 55.5
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.8e-155 553.5 540 54.4
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.8e-155 553.5 555 56.4
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.8e-155 553.5 542 55.4
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 2.4e-155 553.1 555 54.1
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 9.1e-155 551.2 555 53.2
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 4.5e-154 548.9 559 52.4
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 1.1e-152 544.3 531 55.4
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.1e-152 544.3 515 56.9
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 3.2e-152 542.7 530 54.7
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 1.6e-151 540.4 584 51.2
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 6.1e-151 538.5 470 59.6
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 5.7e-149 531.9 461 63.3
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.1e-147 527.7 541 52.3
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.4e-147 527.3 493 58.2
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.4e-147 527.3 536 53.9
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 4.5e-146 522.3 520 53.8
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 5.9e-146 521.9 520 53.8
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.7e-145 520.4 545 52.8
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 2.2e-145 520.0 532 53.9
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 5.0e-145 518.8 413 63.2
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.9e-144 516.9 526 54.4
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 3.2e-144 516.2 517 53.8
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.2e-144 516.2 595 48.6
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 5.5e-144 515.4 589 51.3
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 9.4e-144 514.6 546 52.0
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 9.4e-144 514.6 529 52.2
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 2.1e-143 513.5 523 54.5
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 4.7e-143 512.3 546 51.5
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 1.0e-142 511.1 531 52.4
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.8e-142 510.4 544 51.7
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 3.0e-142 509.6 517 53.0
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 8.8e-142 508.1 533 52.7
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 3.4e-141 506.1 552 51.4
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 1.3e-140 504.2 538 52.0
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 2.4e-139 500.0 544 51.1
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 2.4e-139 500.0 524 52.7
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 4.1e-139 499.2 546 50.9
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 4.1e-139 499.2 546 50.9
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 9.1e-139 498.0 525 52.8
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.6e-138 497.3 527 50.1
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 1.1e-136 491.1 536 49.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 2.1e-135 486.9 534 50.9
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 5.2e-134 482.3 531 49.9
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.5e-133 480.7 490 51.8
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 6.3e-132 475.3 546 49.8
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 6.3e-132 475.3 431 59.4
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 5.4e-131 472.2 532 48.1
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 9.2e-131 471.5 544 49.6
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 3.6e-127 459.5 492 51.4
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 4.0e-126 456.1 555 48.1
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.2e-124 450.3 553 47.6
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.1e-120 438.0 330 67.9
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 1.5e-120 437.6 387 60.7
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 3.4e-117 426.4 371 59.0
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 5.4e-115 419.1 254 79.5
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 9.2e-107 391.7 265 70.6
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.7e-105 387.5 534 43.3
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.9e-104 384.0 545 40.4
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 5.6e-104 382.5 546 40.5
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 8.1e-95 352.1 448 46.4
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 9.3e-91 338.6 281 63.0
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.3e-89 334.7 211 74.4
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 9.6e-88 328.6 418 46.4
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 1.7e-84 317.8 257 58.8
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 5.4e-83 312.8 267 59.9
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 9.6e-72 275.4 450 37.6
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 6.2e-71 272.7 246 58.5
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 3.4e-53 213.8 288 39.6
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 4.7e-50 203.4 502 28.7
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 5.1e-49 199.9 125 75.2
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 8.0e-42 176.0 221 44.8
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 1.6e-37 161.8 233 39.9
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.9e-36 157.5 124 63.7
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.4e-33 148.7 214 40.2
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.8e-30 138.3 106 66.0
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 7.7e-29 132.9 231 39.4
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 9.8e-24 115.9 225 33.3
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 2.2e-23 114.8 315 27.9
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.8e-23 114.4 120 45.8
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.3e-19 100.9 168 35.1
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.2e-19 99.8 266 33.1
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.3e-17 94.7 148 39.9
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.5e-16 92.0 101 48.5
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.5e-16 92.0 145 36.6
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.3e-15 89.0 44 93.2
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 2.9e-15 87.8 169 34.3
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.6e-13 82.0 39 89.7
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 5.9e-13 80.1 65 63.1
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 2.3e-12 78.2 162 37.0
SGA_v2.0_scaffold711G53499 Striga asiatica HOM05D037478 ORTHO05D006867 1.0e-09 69.3 123 40.7
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.8e-09 68.6 110 40.0
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 9.8e-08 62.8 38 76.3


User provided reference genes

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