Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.7e-35 151.4 72 100.0
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 3.1e-31 137.9 72 91.7
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.2e-29 131.7 72 88.9
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 7.1e-28 126.7 72 80.6
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 1.0e-26 122.9 72 80.6
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 8.7e-26 119.8 72 80.6
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.1e-23 111.3 57 87.7
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 2.5e-20 101.7 66 62.1
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 3.2e-20 101.3 65 67.7
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 5.5e-20 100.5 68 67.6
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 9.3e-20 99.8 65 61.5
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 1.6e-19 99.0 64 60.9
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 1.6e-19 99.0 65 61.5
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 2.7e-19 98.2 64 68.8
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 4.6e-19 97.4 65 61.5
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 6.1e-19 97.1 64 67.2
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 6.1e-19 97.1 64 67.2
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 6.1e-19 97.1 64 67.2
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 6.1e-19 97.1 65 64.6
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 7.9e-19 96.7 61 68.9
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 7.9e-19 96.7 64 65.6
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 7.9e-19 96.7 61 65.6
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 1.0e-18 96.3 64 65.6
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 1.3e-18 95.9 64 67.2
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 1.3e-18 95.9 63 61.9
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 1.3e-18 95.9 64 68.8
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 1.8e-18 95.5 62 61.3
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 1.8e-18 95.5 62 58.1
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 2.3e-18 95.1 61 68.9
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 3.0e-18 94.7 67 59.7
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 3.0e-18 94.7 66 57.6
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 3.0e-18 94.7 66 57.6
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 3.0e-18 94.7 65 63.1
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 3.0e-18 94.7 64 56.2
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 3.0e-18 94.7 65 61.5
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 3.9e-18 94.4 64 57.8
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 3.9e-18 94.4 65 64.6
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 8.7e-18 93.2 62 59.7
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 8.7e-18 93.2 68 63.2
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 8.7e-18 93.2 66 57.6
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 8.7e-18 93.2 65 63.1
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 1.1e-17 92.8 62 61.3
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.1e-17 92.8 65 64.6
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 1.1e-17 92.8 61 65.6
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 1.5e-17 92.4 62 59.7
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 1.5e-17 92.4 70 57.1
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 1.9e-17 92.0 66 53.0
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 1.9e-17 92.0 62 62.9
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 1.9e-17 92.0 62 62.9
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 2.5e-17 91.7 66 60.6
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.5e-17 91.7 68 57.4
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 3.3e-17 91.3 65 60.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 4.3e-17 90.9 65 60.0
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 5.7e-17 90.5 64 64.1
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 5.7e-17 90.5 62 56.5
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 5.7e-17 90.5 64 57.8
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 5.7e-17 90.5 67 56.7
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 5.7e-17 90.5 65 60.0
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 7.4e-17 90.1 76 56.6
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 7.4e-17 90.1 67 59.7
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 7.4e-17 90.1 65 58.5
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 9.7e-17 89.7 66 57.6
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 1.3e-16 89.4 73 56.2
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.3e-16 89.4 65 66.2
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.3e-16 89.4 68 55.9
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 1.3e-16 89.4 65 55.4
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 1.6e-16 89.0 72 56.9
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 1.6e-16 89.0 68 58.8
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 1.6e-16 89.0 66 54.5
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 1.6e-16 89.0 65 60.0
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.2e-16 88.6 68 57.4
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 2.2e-16 88.6 72 52.8
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 2.2e-16 88.6 62 54.8
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 2.8e-16 88.2 62 58.1
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 2.8e-16 88.2 68 61.8
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 2.8e-16 88.2 65 60.0
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 3.7e-16 87.8 65 56.9
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 8.2e-16 86.7 71 53.5
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 1.1e-15 86.3 61 59.0
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.1e-15 86.3 62 59.7
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 1.8e-15 85.5 60 60.0
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 2.4e-15 85.1 65 53.8
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 2.4e-15 85.1 72 55.6
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 3.1e-15 84.7 62 51.6
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 3.1e-15 84.7 68 54.4
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 3.1e-15 84.7 64 60.9
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 9.0e-15 83.2 68 52.9
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 4.5e-14 80.9 65 52.3
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 1.3e-13 79.3 62 53.2
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.1e-12 76.3 41 87.8
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 1.4e-12 75.9 69 49.3
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 5.5e-12 73.9 62 50.0
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.2e-11 72.8 72 43.1
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 1.6e-11 72.4 72 43.1
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 1.4e-10 69.3 67 44.8
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.1e-09 66.2 42 64.3
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 2.0e-06 55.5 62 40.3


User provided reference genes

Program Settings