Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-102 376.7 191 100.0
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-79 300.1 190 82.1
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.1e-73 278.1 172 84.9
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-70 268.9 177 79.1
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-39 166.4 114 75.4
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-37 160.2 193 42.0
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.7e-36 156.8 191 46.1
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-35 154.1 192 41.1
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.5e-35 152.9 185 45.9
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.4e-33 147.1 178 43.8
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.3e-31 140.6 173 43.4
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.2e-31 139.8 195 42.6
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.3e-31 138.3 165 42.4
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-30 136.7 177 40.7
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.1e-30 136.0 176 44.3
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.0e-29 133.3 72 81.9
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.5e-28 128.3 177 37.9
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.8e-25 117.9 165 40.0
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.4e-24 114.8 79 58.2
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-23 114.0 162 38.9
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-21 107.1 104 50.0
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.6e-21 107.1 174 37.4
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.9e-21 105.1 180 36.1
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.7e-21 104.8 72 58.3
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.7e-20 103.6 52 86.5
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.9e-20 102.8 109 48.6
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.0e-20 102.1 68 63.2
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 5.0e-20 102.1 77 57.1
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-19 100.5 78 53.8
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-19 100.5 72 58.3
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.5e-19 99.8 107 47.7
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.2e-19 99.4 62 61.3
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 4.2e-19 99.0 145 38.6
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.6e-18 97.1 175 34.9
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-17 94.0 139 40.3
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.2e-17 92.0 102 44.1
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 5.2e-17 92.0 77 50.6
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 6.7e-17 91.7 164 36.6
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.3e-16 89.4 62 58.1
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 4.4e-16 89.0 66 59.1
ClCG02G006040 Citrullus lanatus HOM05D007314 ORTHO05D003768 3.7e-15 85.9 64 67.2
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.1e-14 82.4 165 34.5
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 5.3e-14 82.0 83 54.2
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.0e-13 80.1 170 31.2
MELO3C032453.2 Cucumis melo HOM05D007314 ORTHO05D034924 2.7e-13 79.7 39 87.2
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.5e-13 79.3 57 56.1
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 4.5e-13 79.0 170 37.1
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 7.7e-13 78.2 104 37.5
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 7.7e-13 78.2 141 39.7
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.3e-12 77.4 168 33.3
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 2.9e-12 76.3 156 33.3
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 2.9e-12 76.3 58 58.6
Sed0010248 Sechium edule HOM05D007314 ORTHO05D003768 2.9e-12 76.3 81 51.9
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.0e-12 75.5 37 86.5
Sed0017732 Sechium edule HOM05D007314 ORTHO05D003768 5.0e-12 75.5 84 50.0
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-11 74.3 73 46.6
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-11 73.6 48 60.4
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.2e-11 72.8 154 31.8
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 4.2e-11 72.4 202 30.7
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 5.5e-11 72.0 69 39.1
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 7.2e-11 71.6 75 40.0
MELO3C031186.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.2e-11 71.6 126 35.7
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 9.4e-11 71.2 65 52.3
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-10 70.9 154 31.8
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.1e-10 70.1 189 29.6
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 6.1e-10 68.6 187 26.7
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.0e-10 68.2 42 64.3
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 1.0e-09 67.8 74 41.9
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 1.8e-09 67.0 66 45.5
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.0e-09 65.9 76 43.4
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 8.8e-09 64.7 182 31.9
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.8e-09 64.7 178 31.5
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 8.8e-09 64.7 174 28.2
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.5e-08 63.9 64 46.9
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-08 63.9 153 32.0
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 3.4e-08 62.8 160 26.9
MELO3C034314.2 Cucumis melo HOM05D007314 ORTHO05D167746 4.4e-08 62.4 96 47.9
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 4.4e-08 62.4 182 28.6
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 7.5e-08 61.6 75 36.0
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 1.3e-07 60.8 60 38.3
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 2.2e-07 60.1 58 43.1
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 2.8e-07 59.7 144 27.8
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 3.7e-07 59.3 169 29.0
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.8e-06 57.0 180 26.1
ClCG10G008410 Citrullus lanatus HOM05D007314 ORTHO05D003768 3.1e-06 56.2 73 43.8
ClCG08G004820 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.1e-06 55.8 74 43.2
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 4.1e-06 55.8 148 29.1
Aqoxy3G00743 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 5.4e-06 55.5 53 39.6
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.4e-06 55.5 182 28.6
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 9.1e-06 54.7 187 24.6
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 9.1e-06 54.7 219 27.4


User provided reference genes

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