Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.5e-88 328.9 188 100.0
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.2e-74 283.5 179 84.4
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.5e-72 274.6 179 88.3
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.9e-65 252.3 180 73.3
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.2e-64 248.8 179 73.7
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.1e-63 244.6 161 90.1
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.0e-62 243.8 179 84.9
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.4e-61 238.4 158 77.8
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.7e-61 238.0 179 70.9
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.5e-56 223.4 179 67.6
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.5e-50 202.2 136 76.5
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.3e-46 189.5 179 57.5
MELO3C030181.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.3e-46 189.5 169 61.5
ClCG07G007780 Citrullus lanatus HOM05D007209 ORTHO05D000921 4.1e-43 178.7 162 59.9
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.3e-38 162.9 149 57.7
MELO3C035609.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.5e-37 157.9 97 79.4
MELO3C034962.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.7e-36 155.6 110 70.9
MELO3C034270.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-35 154.1 106 72.6
MELO3C032620.2 Cucumis melo HOM05D007209 ORTHO05D000285 7.8e-34 147.9 163 52.1
ClCG09G017130 Citrullus lanatus HOM05D007209 ORTHO05D000921 3.0e-33 146.0 110 68.2
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.6e-33 144.4 187 44.9
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 1.9e-32 143.3 186 43.5
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 7.3e-32 141.4 185 44.3
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 1.2e-31 140.6 185 43.8
Sed0003641 Sechium edule HOM05D000034 ORTHO05D000037 1.9e-27 126.7 95 62.1
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.1e-24 117.5 189 36.5
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.1e-24 117.5 189 36.5
MELO3C029808.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.6e-24 115.2 91 63.7
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 6.2e-23 111.7 184 39.7
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 8.1e-23 111.3 176 46.6
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 1.1e-22 110.9 195 36.9
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 1.4e-22 110.5 195 36.4
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 9.0e-22 107.8 178 39.3
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 2.6e-21 106.3 176 34.1
Sed0016419 Sechium edule HOM05D007209 ORTHO05D000921 2.9e-20 102.8 179 38.0
MELO3C030265.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-19 100.9 121 51.2
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.1e-19 100.9 168 33.9
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 1.4e-19 100.5 178 38.2
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 1.9e-19 100.1 178 38.2
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 3.2e-19 99.4 163 36.2
Sed0024451 Sechium edule HOM05D007209 ORTHO05D000921 5.4e-19 98.6 179 35.2
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 5.4e-19 98.6 199 33.2
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.5e-18 95.9 183 32.8
MELO3C031404.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.6e-18 95.5 46 95.7
AUR62042144 Chenopodium quinoa HOM05D007209 ORTHO05D000921 6.0e-18 95.1 178 34.8
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 7.8e-18 94.7 183 32.8
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.3e-17 94.0 183 32.2
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 1.3e-17 94.0 204 32.8
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 2.3e-17 93.2 190 34.2
Actinidia24178 Actinidia chinensis HOM05D013777 ORTHO05D000921 3.0e-17 92.8 191 30.9
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-17 92.0 191 33.5
MELO3C032288.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.5e-16 90.5 47 89.4
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 4.3e-16 89.0 201 30.3
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-15 85.9 196 32.7
MELO3C035128.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.1e-15 84.7 73 58.9
MELO3C032294.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.9e-14 81.6 49 83.7
Sed0007988 Sechium edule HOM05D007209 ORTHO05D000921 1.2e-13 80.9 167 33.5
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.5e-13 80.5 197 31.0
Actinidia05403 Actinidia chinensis HOM05D013777 ORTHO05D000921 2.0e-13 80.1 191 29.3
MD17G1072500 Malus domestica HOM05D000005 ORTHO05D000012 2.0e-13 80.1 85 50.6
CANSAT21G1611 Cannabis sativa HOM05D007209 ORTHO05D000921 2.6e-13 79.7 179 34.1
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.4e-13 79.3 190 27.9
MELO3C033464.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.8e-13 78.6 42 83.3
AUR62024947 Chenopodium quinoa HOM05D007209 ORTHO05D000921 7.6e-13 78.2 108 39.8
FAN10G0934 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.9e-13 77.8 97 39.2
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 9.9e-13 77.8 97 41.2
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 9.9e-13 77.8 97 41.2
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.3e-12 77.4 97 39.2
Dinv01169 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-12 77.0 182 31.9
Glyma.15G120200 Glycine max HOM05D007209 ORTHO05D000921 2.2e-12 76.6 188 28.7
COL.COLO4_33426 Corchorus olitorius HOM05D007209 ORTHO05D000921 8.4e-12 74.7 196 27.0
MELO3C032195.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.4e-12 74.7 46 80.4
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 1.1e-11 74.3 171 33.3
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 1.4e-11 73.9 96 37.5
AUR62037673 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.4e-11 73.2 90 44.4
Dinv05467 Davidia involucrata HOM05D007209 ORTHO05D000921 2.4e-11 73.2 170 32.4
Dinv27628 Davidia involucrata HOM05D007209 ORTHO05D000921 2.4e-11 73.2 115 37.4
vmacro18043 Vaccinium macrocarpon HOM05D007209 ORTHO05D000005 3.2e-11 72.8 112 36.6
FvH4_7g11550 Fragaria vesca HOM05D000005 ORTHO05D015660 5.4e-11 72.0 97 37.1
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 9.3e-11 71.2 112 36.6
Hund13763 Selenicereus undatus HOM05D000665 ORTHO05D000921 9.3e-11 71.2 196 28.1
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 1.6e-10 70.5 190 30.0
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 2.7e-10 69.7 151 30.5
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 1.0e-09 67.8 198 28.3
MELO3C029984.2 Cucumis melo HOM05D004229 ORTHO05D025211 1.8e-09 67.0 125 39.2
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 1.8e-09 67.0 190 28.9
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 1.8e-09 67.0 196 28.1
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 1.8e-09 67.0 190 28.9
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 1.8e-09 67.0 190 28.9
EL10Ac2g04750 Beta vulgaris HOM05D000665 ORTHO05D000921 2.3e-09 66.6 180 27.8
FAN06G0059 Fragaria x ananassa HOM05D009879 ORTHO05D009647 2.3e-09 66.6 66 47.0
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 6.7e-09 65.1 196 33.2
Sed0014053 Sechium edule HOM05D000034 ORTHO05D000037 8.7e-09 64.7 40 65.0
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 1.1e-08 64.3 194 27.3
Rhsim01G0206000 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.1e-08 64.3 101 33.7
Dinv23928 Davidia involucrata HOM05D007209 ORTHO05D000921 2.5e-08 63.2 99 37.4
Sed0001448 Sechium edule HOM05D000034 ORTHO05D000037 3.3e-08 62.8 40 62.5
EL10Ac6g14408 Beta vulgaris HOM05D007209 ORTHO05D000921 4.3e-08 62.4 87 41.4
ClCG10G005970 Citrullus lanatus HOM05D007209 ORTHO05D000921 5.6e-08 62.0 40 72.5
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 5.6e-08 62.0 202 33.2
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 7.4e-08 61.6 191 28.3
vmacro19172 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 9.6e-08 61.2 158 39.2
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 1.3e-07 60.8 193 26.9
Sed0005979 Sechium edule HOM05D000034 ORTHO05D000037 2.1e-07 60.1 40 60.0
COL.COLO4_24640 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.7e-07 59.3 134 31.3
Rhsim08G0112700 Rhododendron simsii HOM05D007209 ORTHO05D000921 3.7e-07 59.3 90 40.0
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 4.8e-07 58.9 180 28.3
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 8.1e-07 58.2 45 57.8
ECA246G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.1e-07 58.2 195 23.6
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 1.1e-06 57.8 47 63.8
TAR623G0959 Trochodendron aralioides HOM05D019442 ORTHO05D016484 1.1e-06 57.8 183 25.7
Actinidia22604 Actinidia chinensis HOM05D013777 ORTHO05D009647 1.4e-06 57.4 70 42.9
AUR62012087 Chenopodium quinoa HOM05D000665 ORTHO05D000921 1.8e-06 57.0 53 41.5
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 1.8e-06 57.0 45 57.8
Potri.018G112701 Populus trichocarpa HOM05D007209 ORTHO05D000921 2.4e-06 56.6 108 32.4
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 3.1e-06 56.2 45 57.8
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 3.1e-06 56.2 45 57.8
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.0e-06 55.8 191 26.7
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 5.3e-06 55.5 201 24.9
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 9.0e-06 54.7 201 25.4
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 9.0e-06 54.7 197 22.3
COL.COLO4_35876 Corchorus olitorius HOM05D007209 ORTHO05D000921 9.0e-06 54.7 181 23.8


User provided reference genes

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