Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 6.3e-31 136.7 66 100.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.8e-10 68.2 40 82.5
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 8.0e-10 66.6 43 74.4
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.0e-09 66.2 41 80.5
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.0e-09 66.2 41 78.0
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.4e-09 65.9 40 77.5
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.8e-09 65.5 40 77.5
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.3e-09 65.1 40 80.0
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 2.3e-09 65.1 40 80.0
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.3e-09 65.1 41 78.0
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 3.1e-09 64.7 40 77.5
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.1e-09 64.7 40 77.5
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 3.1e-09 64.7 40 77.5
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.1e-09 64.7 40 77.5
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 3.1e-09 64.7 40 77.5
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 75.0
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 80.0
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 4.0e-09 64.3 40 77.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 77.5
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 77.5
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 77.5
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 77.5
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 5.2e-09 63.9 41 75.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 72.5
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 77.5
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 77.5
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 5.2e-09 63.9 40 77.5
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 6.8e-09 63.5 40 77.5
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 6.8e-09 63.5 40 75.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 6.8e-09 63.5 40 75.0
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 6.8e-09 63.5 40 75.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 6.8e-09 63.5 40 77.5
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 6.8e-09 63.5 40 77.5
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 6.8e-09 63.5 40 77.5
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 77.5
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 77.5
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 77.5
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 77.5
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 8.9e-09 63.2 40 75.0
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.2e-08 62.8 40 77.5
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 1.2e-08 62.8 40 72.5
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 1.2e-08 62.8 40 75.0
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.2e-08 62.8 40 77.5
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.2e-08 62.8 40 75.0
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 75.0
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 75.0
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 75.0
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 75.0
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 75.0
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 75.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 72.5
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.5e-08 62.4 40 75.0
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 72.5
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 72.5
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 75.0
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 75.0
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 75.0
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 75.0
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 72.5
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 2.0e-08 62.0 40 72.5
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.6e-08 61.6 40 75.0
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.6e-08 61.6 40 75.0
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.6e-08 61.6 40 75.0
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 2.6e-08 61.6 40 72.5
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 2.6e-08 61.6 40 77.5
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.4e-08 61.2 39 74.4
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 3.4e-08 61.2 40 75.0
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 4.4e-08 60.8 40 70.0
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 4.4e-08 60.8 40 70.0
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 4.4e-08 60.8 40 70.0
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 5.8e-08 60.5 40 72.5
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 7.5e-08 60.1 40 72.5
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 7.5e-08 60.1 40 70.0
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 9.8e-08 59.7 40 70.0
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.3e-07 59.3 40 72.5
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.7e-07 58.9 40 70.0
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.9e-07 58.2 40 72.5
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 6.4e-07 57.0 40 67.5


User provided reference genes

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