Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 3.0e-210 734.9 377 100.0
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 2.2e-197 692.2 377 95.2
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 1.2e-171 606.7 377 85.7
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 2.4e-135 486.1 378 66.9
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 4.3e-132 475.3 382 65.4
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 1.2e-131 473.8 377 65.3
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.6e-131 473.4 386 65.0
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 2.2e-128 463.0 378 63.5
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 1.9e-127 459.9 378 63.8
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 2.5e-124 449.5 378 62.4
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 7.3e-124 448.0 378 60.8
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 7.3e-124 448.0 380 63.7
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 1.2e-123 447.2 379 61.7
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 1.1e-122 444.1 378 60.3
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 5.2e-122 441.8 378 59.3
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 6.8e-122 441.4 382 61.0
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 8.9e-122 441.0 379 61.2
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 3.8e-120 435.6 378 60.8
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 4.9e-120 435.3 378 60.1
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 6.4e-120 434.9 378 59.8
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 1.1e-119 434.1 378 60.3
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.9e-119 433.3 379 61.5
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 3.2e-119 432.6 378 59.8
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 7.1e-119 431.4 282 78.7
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.2e-118 430.6 380 60.8
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 7.8e-118 427.9 378 59.3
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 7.8e-118 427.9 377 58.4
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 6.6e-117 424.9 381 58.5
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.5e-116 423.7 381 60.6
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.9e-116 423.3 380 60.3
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 7.3e-116 421.4 379 59.6
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 1.3e-115 420.6 378 58.5
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 1.6e-115 420.2 378 58.2
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 3.6e-115 419.1 377 60.5
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 8.1e-115 417.9 377 57.6
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.8e-114 416.8 376 59.6
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 3.1e-114 416.0 379 59.4
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 4.0e-114 415.6 378 58.5
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 5.3e-114 415.2 380 60.5
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 9.0e-114 414.5 378 58.2
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.2e-113 414.1 381 57.7
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 7.6e-113 411.4 377 58.1
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 7.6e-113 411.4 383 58.7
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 9.9e-113 411.0 380 56.6
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 1.3e-112 410.6 377 58.1
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.3e-112 410.6 378 57.4
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 3.2e-111 406.0 378 56.9
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 5.1e-109 398.7 378 56.3
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 6.6e-109 398.3 380 58.2
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 6.6e-109 398.3 378 56.6
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.1e-108 397.5 383 56.7
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 1.5e-108 397.1 378 58.5
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 3.3e-108 396.0 377 56.2
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 7.4e-108 394.8 378 56.9
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 3.6e-107 392.5 381 56.2
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 3.1e-106 389.4 380 55.3
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 1.5e-105 387.1 377 54.6
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 2.6e-105 386.3 380 55.3
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 1.4e-103 380.6 377 53.6
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 4.2e-103 379.0 383 56.4
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 4.2e-103 379.0 334 58.7
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 5.5e-103 378.6 380 56.1
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.6e-102 377.1 381 55.6
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 1.0e-101 374.4 383 55.6
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 1.3e-101 374.0 327 59.6
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 3.9e-101 372.5 381 52.8
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 1.1e-100 370.9 383 55.4
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 1.1e-100 370.9 380 55.8
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 1.5e-100 370.5 383 54.8
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 2.5e-100 369.8 380 54.2
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 3.3e-100 369.4 381 54.1
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 4.3e-100 369.0 381 54.3
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 5.6e-100 368.6 382 53.9
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 9.6e-100 367.9 383 54.0
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 9.6e-100 367.9 383 54.0
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 1.3e-99 367.5 381 54.6
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 4.8e-99 365.5 399 51.4
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 8.1e-99 364.8 383 53.5
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 1.4e-98 364.0 391 48.1
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.5e-97 360.5 387 53.5
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 2.0e-97 360.1 387 53.5
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 5.8e-97 358.6 387 53.2
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 5.8e-97 358.6 387 53.0
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 5.8e-97 358.6 345 57.7
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 8.4e-96 354.8 399 52.1
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 4.2e-95 352.4 377 51.2
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 1.2e-94 350.9 378 52.9
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 3.5e-94 349.4 384 52.3
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 2.3e-93 346.7 406 50.7
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 2.1e-91 340.1 386 48.4
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 2.1e-91 340.1 385 49.4
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 1.1e-82 311.2 386 47.4
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 6.5e-72 275.4 317 51.1
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 6.5e-72 275.4 261 54.8
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.5e-68 264.2 257 54.1
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 3.3e-68 263.1 388 39.9
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 1.5e-63 247.7 225 61.3
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.6e-62 244.2 200 61.5
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 2.0e-60 237.3 387 37.7
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.9e-55 220.7 384 39.1
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 1.1e-50 204.9 179 58.7
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.0e-48 198.4 173 59.5
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 3.2e-47 193.4 170 61.2
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 5.5e-47 192.6 169 61.5
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 5.5e-47 192.6 378 38.4
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 5.2e-45 186.0 380 34.5
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 2.0e-44 184.1 154 62.3
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 2.2e-43 180.6 280 40.0
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 3.5e-41 173.3 233 45.9
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 8.3e-35 152.1 162 53.1
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 8.0e-30 135.6 158 48.7
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 4.0e-29 133.3 160 50.6
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.3e-27 128.3 192 42.2
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.0e-25 120.9 190 38.9
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.0e-24 118.6 190 38.4
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.9e-23 114.4 143 51.0
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 9.8e-20 102.1 165 32.1
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 8.6e-16 89.0 100 46.0
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 8.6e-16 89.0 73 60.3
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.1e-15 88.6 93 49.5
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.2e-14 85.1 83 51.8
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.2e-11 74.3 82 41.5
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 1.2e-06 58.5 431 22.7
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.6e-06 58.2 74 41.9


User provided reference genes

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