Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.7e-45 185.7 96 100.0
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 3.6e-43 177.9 96 94.8
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 6.1e-43 177.2 93 97.8
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 9.2e-39 163.3 94 87.2
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 4.4e-33 144.4 91 75.8
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 7.5e-33 143.7 93 78.5
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 2.9e-32 141.7 91 72.5
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 4.9e-32 141.0 96 75.0
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 2.0e-30 135.6 75 86.7
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 7.8e-30 133.7 95 69.5
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 1.0e-29 133.3 91 71.4
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.0e-29 133.3 91 71.4
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.0e-29 133.3 91 71.4
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 1.7e-29 132.5 91 70.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 1.7e-29 132.5 91 68.1
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 1.7e-29 132.5 96 66.7
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.0e-29 131.7 96 69.8
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 5.0e-29 131.0 96 70.8
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 6.6e-29 130.6 96 63.5
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.9e-28 129.0 91 71.4
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.5e-28 128.6 96 67.7
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.5e-28 128.6 96 67.7
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 2.5e-28 128.6 91 69.2
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 3.3e-28 128.3 94 67.0
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 4.3e-28 127.9 96 68.8
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.6e-28 127.5 91 70.3
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 7.3e-28 127.1 74 82.4
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 9.5e-28 126.7 91 67.0
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.2e-27 126.3 96 64.6
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.2e-27 126.3 96 68.8
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 2.1e-27 125.6 72 81.9
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 3.6e-27 124.8 94 64.9
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 4.7e-27 124.4 89 67.4
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 4.7e-27 124.4 96 65.6
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 8.0e-27 123.6 90 65.6
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 8.0e-27 123.6 80 76.2
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 8.0e-27 123.6 92 67.4
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 8.0e-27 123.6 72 81.9
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 8.0e-27 123.6 77 72.7
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 8.0e-27 123.6 96 69.8
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.1e-26 123.2 89 74.2
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.1e-26 123.2 89 67.4
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 1.4e-26 122.9 74 77.0
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.4e-26 122.9 77 74.0
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.8e-26 122.5 96 67.7
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 1.8e-26 122.5 94 62.8
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 2.3e-26 122.1 80 76.2
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.3e-26 122.1 96 65.6
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.1e-26 121.7 73 79.5
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 4.0e-26 121.3 96 66.7
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 8.9e-26 120.2 90 64.4
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 2.0e-25 119.0 96 62.5
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.0e-25 119.0 91 68.1
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 2.6e-25 118.6 96 62.5
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 5.8e-25 117.5 92 64.1
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 5.8e-25 117.5 92 64.1
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 9.8e-25 116.7 92 64.1
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 9.8e-25 116.7 89 59.6
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.2e-24 115.5 76 72.4
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 3.7e-24 114.8 92 63.0
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 3.7e-24 114.8 74 71.6
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 3.7e-24 114.8 92 65.2
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.9e-23 112.5 92 63.0
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 1.9e-23 112.5 96 64.6
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 2.4e-23 112.1 91 64.8
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 4.1e-23 111.3 91 56.0
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 7.1e-23 110.5 75 66.7
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 7.1e-23 110.5 75 66.7
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 9.2e-23 110.2 74 68.9
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 9.2e-23 110.2 74 68.9
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 2.7e-22 108.6 91 63.7
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 3.5e-22 108.2 91 61.5
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.5e-22 108.2 72 72.2
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 4.6e-22 107.8 76 67.1
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 6.0e-22 107.5 91 62.6
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.3e-21 106.3 96 57.3
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.7e-21 105.9 69 69.6
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 2.3e-21 105.5 71 70.4
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 7.3e-20 100.5 72 68.1
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 1.2e-19 99.8 96 55.2
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.2e-19 99.8 53 83.0
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 3.6e-19 98.2 65 69.2
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 4.0e-18 94.7 110 48.2
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.2e-14 83.2 88 44.3
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 3.9e-13 78.2 49 73.5
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 6.6e-13 77.4 84 46.4
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 2.5e-12 75.5 50 72.0
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 9.6e-12 73.6 55 63.6
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.2e-11 73.2 104 42.3
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 5.8e-09 64.3 41 68.3
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.3e-08 63.2 69 47.8
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 7.1e-07 57.4 50 58.0


User provided reference genes

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