Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.6e-217 759.2 394 100.0
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 2.7e-177 625.5 395 86.3
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.7e-147 526.6 409 72.9
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.2e-146 521.9 418 72.2
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.2e-146 521.9 418 72.2
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 1.3e-110 404.1 427 60.0
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 1.5e-98 364.0 399 57.6
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 1.7e-59 234.2 443 41.8
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.5e-58 231.1 454 39.9
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 1.2e-57 228.0 430 39.1
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 8.9e-56 221.9 430 38.8
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 3.4e-55 219.9 433 40.4
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 1.3e-54 218.0 439 38.3
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.7e-54 217.6 439 37.8
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 2.2e-54 217.2 378 42.1
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 8.3e-54 215.3 439 40.1
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 2.4e-53 213.8 414 38.4
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 7.1e-53 212.2 468 38.5
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.2e-52 211.5 446 37.9
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.1e-52 210.7 425 37.4
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 2.7e-52 210.3 463 36.1
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.5e-52 209.9 378 41.8
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.0e-52 209.1 415 39.0
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 5.1e-51 206.1 472 36.9
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 6.6e-51 205.7 429 38.9
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 1.1e-50 204.9 443 37.7
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 1.5e-50 204.5 436 38.1
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 2.5e-50 203.8 421 38.7
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 3.3e-50 203.4 435 35.6
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 5.6e-50 202.6 437 36.8
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 7.3e-50 202.2 421 38.7
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 3.6e-49 199.9 415 38.6
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 8.1e-49 198.7 380 39.5
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 1.1e-48 198.4 427 37.7
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 5.2e-48 196.1 432 36.8
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 5.2e-48 196.1 472 34.1
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 2.6e-47 193.7 428 35.7
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 3.4e-47 193.4 418 37.1
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 3.4e-47 193.4 453 34.9
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 7.6e-47 192.2 410 35.1
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 1.7e-46 191.0 427 36.1
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 2.2e-46 190.7 420 35.5
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 1.1e-45 188.3 424 37.3
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 3.2e-45 186.8 424 37.0
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 5.4e-45 186.0 430 36.5
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 2.7e-44 183.7 433 34.6
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 6.2e-41 172.6 479 33.2
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 6.2e-41 172.6 204 48.0
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 3.1e-40 170.2 440 34.3
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 4.0e-40 169.9 453 34.0
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 9.0e-40 168.7 450 34.2
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 1.2e-39 168.3 403 35.0
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 2.0e-39 167.5 425 33.2
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 2.6e-39 167.2 428 34.8
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 3.4e-39 166.8 448 35.5
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 3.4e-39 166.8 423 36.4
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 5.8e-39 166.0 413 34.1
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 7.6e-39 165.6 412 34.7
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 9.9e-39 165.2 408 34.3
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 2.9e-38 163.7 412 34.5
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 2.9e-38 163.7 411 34.5
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 3.8e-38 163.3 440 33.0
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 6.4e-38 162.5 416 33.4
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 6.4e-38 162.5 482 31.5
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 6.4e-38 162.5 429 34.0
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.4e-37 161.4 438 32.6
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 1.9e-37 161.0 466 33.7
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 2.4e-37 160.6 442 34.4
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 4.2e-37 159.8 408 34.1
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 4.2e-37 159.8 408 34.1
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 5.4e-37 159.5 424 34.4
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 1.6e-36 157.9 422 34.8
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 2.1e-36 157.5 427 34.4
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 1.3e-35 154.8 422 34.8
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.3e-35 154.8 379 34.0
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 8.7e-35 152.1 433 32.3
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 1.1e-34 151.8 431 32.9
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 3.3e-34 150.2 422 33.6
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 4.3e-34 149.8 412 32.8
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 7.3e-34 149.1 443 33.9
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 2.8e-33 147.1 319 35.4
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 2.8e-33 147.1 456 30.7
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 3.6e-33 146.7 421 32.3
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 6.2e-33 146.0 226 41.6
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 8.1e-33 145.6 192 46.4
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 3.1e-32 143.7 470 31.9
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 3.1e-32 143.7 448 29.7
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 6.9e-32 142.5 405 33.1
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 3.2e-29 133.7 169 49.7
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 2.1e-28 131.0 470 29.8
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 8.7e-27 125.6 409 30.6
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 3.3e-26 123.6 480 27.1
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.3e-25 121.7 439 30.5
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 4.8e-25 119.8 447 29.5
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 8.1e-25 119.0 432 30.3
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 3.4e-23 113.6 173 42.8
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 7.6e-23 112.5 316 32.0
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 7.6e-23 112.5 449 26.7
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 9.9e-23 112.1 270 33.0
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 7.1e-21 105.9 140 40.0
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 5.6e-18 96.3 279 31.9
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 4.5e-15 86.7 282 30.9
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.7e-12 77.4 296 29.7
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.3e-11 74.3 131 41.2
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 1.1e-10 72.0 127 41.7
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 1.1e-10 72.0 224 30.8
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 5.7e-10 69.7 127 40.9
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 1.1e-08 65.5 205 31.2
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 1.4e-08 65.1 436 25.5
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 2.6e-07 60.8 75 41.3
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 1.0e-06 58.9 110 40.0
MELO3C029057.2 Cucumis melo HOM05D000768 ORTHO05D014712 1.0e-06 58.9 30 93.3
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 3.8e-06 57.0 141 31.9


User provided reference genes

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