Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016550.2 Cucumis melo HOM05D008538 ORTHO05D010142 4.0e-99 364.8 187 100.0
CsaV3_3G006000 Cucumis sativus L. HOM05D008538 ORTHO05D010142 1.2e-63 246.9 158 84.2
ClCG10G006550 Citrullus lanatus HOM05D008538 ORTHO05D010142 2.0e-58 229.6 149 81.2
Sed0026392 Sechium edule HOM05D008538 ORTHO05D010142 1.9e-40 169.9 147 67.3
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 4.6e-18 95.5 159 39.0
QL08p018693 Quercus lobata HOM05D008538 ORTHO05D010142 1.3e-17 94.0 142 43.7
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 1.7e-17 93.6 142 41.5
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 2.5e-16 89.7 143 42.0
QL93p2023_0080 Quercus lobata HOM05D008538 ORTHO05D010142 4.3e-16 89.0 142 43.7
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 1.2e-15 87.4 138 43.5
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 2.1e-15 86.7 122 48.4
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 6.2e-15 85.1 147 42.2
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 8.1e-15 84.7 130 42.3
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 1.1e-14 84.3 139 41.0
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 4.0e-14 82.4 147 39.5
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 1.2e-13 80.9 151 42.4
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 1.5e-13 80.5 184 33.7
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 9.9e-13 77.8 140 42.9
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 9.9e-13 77.8 140 42.9
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 9.9e-13 77.8 140 42.9
Manes.15G083500 Manihot esculenta HOM05D008538 ORTHO05D010142 3.5e-10 69.3 139 39.6
Manes.03G116200 Manihot esculenta HOM05D008538 ORTHO05D010142 1.0e-09 67.8 127 41.7
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 2.3e-09 66.6 128 42.2
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 3.0e-09 66.2 128 39.8
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 1.6e-07 60.5 131 38.2
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 8.1e-07 58.2 158 32.3
Thecc.07G072500 Theobroma cacao HOM05D019219 ORTHO05D010142 8.1e-07 58.2 130 41.5
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 1.1e-06 57.8 129 36.4


User provided reference genes

Program Settings