Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 4.0e-48 194.5 103 100.0
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 1.5e-39 166.0 103 88.3
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 1.5e-39 166.0 103 88.3
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 6.0e-28 127.5 74 91.9
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 1.6e-17 92.8 69 71.0
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 4.8e-17 91.3 69 69.6
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 2.4e-16 89.0 96 56.2
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 3.1e-16 88.6 88 54.5
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 4.0e-16 88.2 53 79.2
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 5.3e-16 87.8 54 81.5
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 6.9e-16 87.4 56 76.8
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 6.9e-16 87.4 80 60.0
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 9.0e-16 87.0 88 58.0
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 1.2e-15 86.7 55 72.7
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 1.5e-15 86.3 91 53.8
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 2.0e-15 85.9 84 60.7
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 2.6e-15 85.5 69 73.9
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 5.8e-15 84.3 55 76.4
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 5.8e-15 84.3 63 65.1
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 7.6e-15 84.0 108 47.2
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 7.6e-15 84.0 53 75.5
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 7.6e-15 84.0 68 69.1
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 9.9e-15 83.6 82 56.1
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 9.9e-15 83.6 53 75.5
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 9.9e-15 83.6 55 72.7
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 9.9e-15 83.6 55 76.4
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 1.7e-14 82.8 79 59.5
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 1.7e-14 82.8 79 55.7
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 2.2e-14 82.4 83 57.8
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 2.2e-14 82.4 53 77.4
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 3.8e-14 81.6 53 73.6
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 3.8e-14 81.6 54 79.6
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 4.9e-14 81.3 66 65.2
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 4.9e-14 81.3 53 71.7
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 6.4e-14 80.9 58 69.0
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 8.4e-14 80.5 88 53.4
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 8.4e-14 80.5 54 75.9
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 1.1e-13 80.1 53 71.7
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 1.1e-13 80.1 83 54.2
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 1.1e-13 80.1 58 69.0
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 1.4e-13 79.7 82 54.9
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 2.4e-13 79.0 75 58.7
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 2.4e-13 79.0 53 75.5
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 4.2e-13 78.2 77 55.8
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 7.1e-13 77.4 54 72.2
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 7.1e-13 77.4 54 70.4
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 9.3e-13 77.0 58 65.5
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 9.3e-13 77.0 68 60.3
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 9.3e-13 77.0 70 60.0
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 1.6e-12 76.3 77 55.8
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 1.6e-12 76.3 77 55.8
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 1.6e-12 76.3 77 55.8
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 2.1e-12 75.9 77 55.8
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 2.1e-12 75.9 50 72.0
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 2.1e-12 75.9 64 62.5
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 2.1e-12 75.9 96 50.0
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 2.7e-12 75.5 86 54.7
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 4.6e-12 74.7 77 51.9
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 7.8e-12 73.9 88 51.1
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 7.8e-12 73.9 70 60.0
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 1.0e-11 73.6 89 47.2
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 1.0e-11 73.6 74 54.1
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 1.7e-11 72.8 66 59.1
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 2.3e-11 72.4 55 65.5
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 2.3e-11 72.4 78 57.7
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 3.9e-11 71.6 90 45.6
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 8.7e-11 70.5 69 53.6
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 8.7e-11 70.5 69 53.6
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.1e-10 70.1 69 53.6
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 4.3e-10 68.2 69 52.2
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 7.3e-10 67.4 53 67.9
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 1.3e-09 66.6 83 48.2
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 3.6e-09 65.1 76 52.6
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 1.4e-08 63.2 48 64.6
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 9.9e-07 57.0 66 45.5


User provided reference genes

Program Settings