Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 4.5e-161 571.2 297 100.0
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.0e-152 543.5 298 95.6
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 7.2e-151 537.3 312 91.3
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 1.4e-133 479.9 298 88.3
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 3.7e-131 471.9 296 82.1
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 5.0e-128 461.5 297 81.1
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 1.1e-127 460.3 297 79.8
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 3.3e-127 458.8 297 80.8
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 5.6e-127 458.0 298 81.5
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 2.1e-126 456.1 299 80.6
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 1.1e-125 453.8 299 80.9
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 1.4e-125 453.4 297 79.5
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 1.4e-125 453.4 297 78.5
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 1.4e-125 453.4 297 79.5
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 1.8e-125 453.0 297 80.1
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 5.2e-125 451.4 297 79.8
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 8.9e-125 450.7 297 77.4
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 2.2e-123 446.0 299 79.9
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 2.2e-123 446.0 298 78.9
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 2.4e-122 442.6 297 76.8
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 2.4e-122 442.6 299 78.3
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 5.4e-122 441.4 297 77.8
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 9.2e-122 440.7 298 77.9
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 9.2e-122 440.7 297 78.8
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 9.2e-122 440.7 297 79.1
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 2.7e-121 439.1 299 77.6
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 7.8e-121 437.6 298 78.2
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.3e-120 436.0 297 76.1
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 6.6e-120 434.5 301 75.4
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 6.6e-120 434.5 298 77.9
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 2.5e-119 432.6 300 76.3
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.5e-119 432.6 304 75.0
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 4.3e-119 431.8 297 75.1
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.6e-119 431.4 298 75.8
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 9.5e-119 430.6 300 76.7
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 2.1e-118 429.5 304 77.0
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 2.8e-118 429.1 299 75.6
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 6.2e-118 427.9 297 75.1
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 6.2e-118 427.9 298 75.5
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 6.2e-118 427.9 298 75.5
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.1e-118 427.6 298 75.5
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 1.1e-117 427.2 297 75.8
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 1.1e-117 427.2 298 76.8
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.4e-117 426.8 298 75.5
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.8e-117 426.4 298 75.2
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 4.0e-117 425.2 298 75.2
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 5.2e-117 424.9 298 74.8
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 5.2e-117 424.9 298 77.2
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 8.9e-117 424.1 299 77.3
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 8.9e-117 424.1 297 76.1
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.5e-116 423.3 298 74.8
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 4.4e-116 421.8 294 75.9
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 5.8e-116 421.4 299 76.6
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 7.5e-116 421.0 297 74.4
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 7.5e-116 421.0 293 74.1
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 9.9e-116 420.6 302 75.5
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 9.9e-116 420.6 298 74.5
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 2.9e-115 419.1 299 75.3
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 4.9e-115 418.3 297 73.7
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 6.4e-115 417.9 300 75.0
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 8.3e-115 417.5 297 74.1
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 1.2e-113 413.7 298 74.5
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 2.1e-113 412.9 297 73.4
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 3.5e-113 412.1 301 73.4
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 4.6e-113 411.8 298 72.8
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 6.0e-113 411.4 299 73.9
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 7.8e-113 411.0 299 73.9
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 1.7e-112 409.8 297 73.1
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 3.0e-112 409.1 299 70.9
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 6.6e-112 407.9 297 73.4
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 8.6e-112 407.5 299 72.6
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 8.6e-112 407.5 299 73.2
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 1.1e-111 407.1 297 73.1
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.1e-111 407.1 298 72.1
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.1e-111 407.1 297 72.7
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 1.9e-111 406.4 299 73.6
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 2.5e-111 406.0 298 73.2
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 2.5e-111 406.0 297 72.1
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 3.3e-111 405.6 297 73.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 5.6e-111 404.8 297 72.7
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 9.5e-111 404.1 300 73.3
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 2.1e-110 402.9 298 71.5
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 2.8e-110 402.5 298 73.8
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 2.8e-110 402.5 298 73.8
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 4.7e-110 401.7 298 73.5
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 4.7e-110 401.7 298 73.5
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 4.7e-110 401.7 298 73.5
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 8.1e-110 401.0 301 72.1
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 1.8e-109 399.8 297 72.4
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 2.4e-109 399.4 298 70.8
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 3.1e-109 399.1 228 85.5
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 4.0e-109 398.7 241 84.2
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 4.0e-109 398.7 297 73.1
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 3.4e-108 395.6 300 70.3
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 4.4e-108 395.2 297 71.0
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.1e-106 390.6 306 69.3
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 1.6e-105 386.7 298 70.1
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 2.1e-105 386.3 299 71.9
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.3e-104 383.6 236 81.8
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.9e-103 379.8 264 74.6
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 1.2e-102 377.1 301 70.1
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 4.0e-101 372.1 308 69.2
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 5.8e-100 368.2 234 79.5
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 1.3e-99 367.1 299 69.6
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.9e-93 344.7 225 76.4
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 3.4e-92 342.4 226 76.1
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 6.4e-91 338.2 205 82.0
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 1.1e-90 337.4 226 75.7
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 5.4e-90 335.1 227 73.6
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.0e-88 330.9 223 73.1
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 2.4e-85 319.7 224 72.3
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 3.8e-83 312.4 225 70.2
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 4.5e-76 288.9 203 69.0
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 7.6e-76 288.1 214 72.9
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 2.7e-73 279.6 226 62.8
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 3.3e-63 246.1 137 86.9
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.0e-59 234.6 145 75.9
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 1.2e-49 201.1 229 43.7
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 5.2e-48 195.7 202 48.0
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 2.8e-38 163.3 224 40.6
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 9.1e-37 158.3 89 88.8
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 1.6e-36 157.5 86 88.4
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 2.0e-36 157.1 83 95.2
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 4.2e-26 122.9 64 90.6
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 8.3e-14 82.0 86 58.1


User provided reference genes

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