Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 1.1e-226 789.6 392 100.0
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 2.9e-216 755.0 392 95.4
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 1.7e-203 712.6 408 87.7
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 4.4e-188 661.4 393 83.0
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 9.8e-172 607.1 391 73.1
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 5.4e-170 601.3 396 72.0
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 1.6e-169 599.7 394 72.1
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.0e-169 599.4 393 72.0
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.7e-169 599.0 395 73.2
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 7.8e-169 597.4 387 74.4
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.0e-168 597.0 394 71.6
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 1.7e-168 596.3 390 74.1
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.3e-168 595.9 393 74.3
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 2.3e-168 595.9 395 73.7
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 1.9e-167 592.8 390 73.3
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.5e-167 592.4 389 75.1
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 4.3e-167 591.7 390 71.3
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 5.6e-167 591.3 390 71.3
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 1.6e-166 589.7 392 73.2
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.6e-166 589.7 390 74.6
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.6e-166 589.7 394 71.3
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.6e-166 588.6 372 73.9
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.6e-166 588.6 390 74.6
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 8.0e-166 587.4 409 68.9
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.8e-165 586.3 400 70.5
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.3e-165 585.9 390 74.4
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 8.9e-165 583.9 423 69.0
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 9.8e-164 580.5 399 69.9
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.3e-163 580.1 390 72.1
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 1.3e-163 580.1 393 70.7
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.3e-163 580.1 399 72.4
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 1.7e-163 579.7 390 71.8
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 2.2e-163 579.3 399 70.2
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.9e-163 578.9 393 70.0
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 6.4e-163 577.8 399 69.2
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 1.4e-162 576.6 396 69.7
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 2.4e-162 575.9 399 69.7
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 4.1e-162 575.1 388 72.7
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 2.3e-160 569.3 395 68.4
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 6.6e-160 567.8 367 73.3
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 1.9e-159 566.2 398 69.1
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 4.3e-159 565.1 364 74.5
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 5.6e-159 564.7 395 68.1
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 9.5e-159 563.9 364 73.9
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 2.1e-158 562.8 395 68.1
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.8e-158 562.4 398 70.1
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 4.7e-158 561.6 391 69.1
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 4.7e-158 561.6 391 69.1
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 4.7e-158 561.6 365 72.6
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 4.7e-158 561.6 398 68.3
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 6.2e-158 561.2 403 68.2
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 1.4e-157 560.1 396 67.9
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 1.8e-157 559.7 395 68.9
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 1.8e-157 559.7 370 71.4
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.3e-157 559.3 398 68.1
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 3.1e-157 558.9 392 68.4
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 3.1e-157 558.9 393 68.7
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 3.1e-157 558.9 393 68.7
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 8.9e-157 557.4 393 68.4
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 1.5e-156 556.6 375 70.1
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 2.0e-156 556.2 393 68.4
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 4.4e-156 555.1 388 67.5
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 1.3e-155 553.5 398 67.6
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 1.3e-155 553.5 364 71.7
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 2.9e-155 552.4 437 63.8
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 3.7e-155 552.0 379 69.9
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 3.7e-155 552.0 364 71.7
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 6.4e-155 551.2 394 67.5
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 6.4e-155 551.2 401 66.6
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 8.3e-155 550.8 391 69.8
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 2.4e-154 549.3 364 71.7
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 2.4e-154 549.3 364 70.3
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 3.2e-154 548.9 364 70.6
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 4.1e-154 548.5 363 70.8
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 1.2e-153 547.0 369 71.5
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 2.1e-153 546.2 395 66.8
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 2.7e-153 545.8 395 66.8
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 2.7e-153 545.8 376 68.9
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 2.7e-153 545.8 390 68.2
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 7.8e-153 544.3 395 66.8
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 7.8e-153 544.3 395 66.8
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 7.8e-153 544.3 391 69.1
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 1.7e-152 543.1 390 67.9
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 3.0e-152 542.3 428 63.1
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.5e-151 540.0 355 72.4
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 4.3e-151 538.5 393 66.9
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 5.6e-151 538.1 358 70.4
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 2.8e-150 535.8 391 66.0
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 2.8e-150 535.8 360 69.2
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 3.6e-150 535.4 360 70.0
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 1.1e-149 533.9 390 66.7
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 4.0e-149 531.9 384 65.9
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.2e-148 530.4 354 70.3
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 3.4e-148 528.9 331 75.5
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 1.7e-147 526.6 398 63.8
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 1.6e-145 520.0 522 53.3
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 2.1e-145 519.6 391 67.8
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 6.0e-145 518.1 419 61.1
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 1.3e-144 516.9 391 67.3
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 2.5e-143 512.7 365 67.1
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 3.3e-143 512.3 353 68.6
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 5.6e-143 511.5 359 69.6
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 7.3e-143 511.1 343 70.8
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 9.6e-143 510.8 393 65.1
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 4.7e-142 508.4 524 52.7
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.8e-141 506.5 344 70.3
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.8e-141 506.5 344 70.3
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.0e-141 505.4 331 73.1
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 1.3e-139 500.4 327 73.1
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 3.0e-136 489.2 371 65.0
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.1e-136 488.4 323 74.3
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.6e-135 485.0 323 74.0
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 2.0e-132 476.5 419 59.2
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.5e-129 465.7 347 64.3
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 1.3e-128 463.8 366 58.7
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 1.3e-128 463.8 318 67.9
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.8e-128 463.4 349 65.3
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 8.7e-128 461.1 382 58.1
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 1.3e-126 457.2 389 60.2
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.8e-126 456.1 293 73.0
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 9.0e-125 451.1 315 70.8
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 7.6e-124 448.0 361 63.2
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 1.7e-123 446.8 365 55.3
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 3.2e-122 442.6 293 70.6
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 2.6e-116 422.9 354 57.1
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 3.8e-115 419.1 382 54.5
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.9e-114 416.8 270 74.8
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.6e-113 413.7 369 55.3
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 1.1e-106 391.0 396 51.3
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.7e-102 375.9 250 71.2
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 6.9e-101 371.7 246 70.3
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 1.0e-99 367.9 218 78.4
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 3.2e-98 362.8 253 71.1
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 3.7e-94 349.4 206 79.6
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 6.7e-80 302.0 385 41.0
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 3.4e-71 273.1 177 73.4
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 9.8e-63 245.0 324 41.4
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 9.2e-61 238.4 334 41.3
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 1.2e-44 184.9 177 54.8
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 1.8e-40 171.0 143 62.9
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 7.8e-36 155.6 93 77.4
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 6.8e-32 142.5 85 74.1
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 2.6e-23 114.0 73 75.3
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 1.2e-20 105.1 113 48.7
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.3e-17 95.1 56 82.1
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.3e-17 95.1 56 82.1
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.3e-17 95.1 56 82.1
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.6e-17 93.6 56 80.4
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 6.2e-17 92.8 96 52.1
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 1.4e-16 91.7 54 81.5
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 9.0e-16 89.0 93 48.4
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.5e-15 88.2 62 67.7
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 1.1e-13 82.0 72 62.5
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.9e-13 81.3 54 63.0
Gohir.D02G161780 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.8e-08 64.7 36 83.3
Gohir.D10G176966 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.8e-08 64.7 36 83.3
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 1.2e-07 62.0 32 81.2
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 3.4e-07 60.5 77 44.2
Gorai.011G197900 Gossypium raimondii HOM05D004519 ORTHO05D017048 5.8e-07 59.7 36 77.8


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