Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002341.2 Cucumis melo HOM05D007996 ORTHO05D009821 1.9e-31 138.7 75 100.0
CsaV3_1G009400 Cucumis sativus L. HOM05D007996 ORTHO05D009821 3.1e-26 121.3 75 90.7
ClCG03G003560 Citrullus lanatus HOM05D007996 ORTHO05D009821 5.2e-21 104.0 73 79.5
Sed0027846 Sechium edule HOM05D007996 ORTHO05D009821 1.4e-18 95.9 73 75.3
Sed0008862 Sechium edule HOM05D007996 ORTHO05D009821 1.3e-16 89.4 72 69.4
CiPaw.12G036300 Carya illinoinensis HOM05D007996 ORTHO05D009821 1.1e-10 69.7 73 58.9
Thecc.03G124100 Theobroma cacao HOM05D007996 ORTHO05D009821 2.0e-09 65.5 71 59.2
QL10p004811 Quercus lobata HOM05D007996 ORTHO05D009821 2.7e-09 65.1 73 57.5
Atru.chr9.1020 Acer truncatum HOM05D007996 ORTHO05D009821 1.0e-08 63.2 71 56.3
Gohir.A12G188200 Gossypium hirsutum HOM05D007996 ORTHO05D009821 1.3e-08 62.8 74 56.8
Gohir.D12G191000 Gossypium hirsutum HOM05D007996 ORTHO05D009821 1.3e-08 62.8 74 56.8
Gorai.008G204900 Gossypium raimondii HOM05D007996 ORTHO05D009821 1.3e-08 62.8 74 56.8
TWI14G0037 Tripterygium wilfordii HOM05D007996 ORTHO05D009821 1.3e-08 62.8 71 53.5
CAN.G1046.7 Capsicum annuum HOM05D007996 ORTHO05D009821 1.7e-08 62.4 75 54.7
vmacro19229 Vaccinium macrocarpon HOM05D007996 ORTHO05D009821 2.2e-08 62.0 75 50.7
AUR62001291 Chenopodium quinoa HOM05D007996 ORTHO05D009821 3.8e-08 61.2 73 50.7
Glyma.05G045400 Glycine max HOM05D007996 ORTHO05D009821 3.8e-08 61.2 73 54.8
Potri.012G094000 Populus trichocarpa HOM05D007996 ORTHO05D009821 3.8e-08 61.2 38 84.2
PGSC0003DMG400027111 Solanum tuberosum HOM05D007996 ORTHO05D009821 3.8e-08 61.2 75 54.7
Manes.14G054700 Manihot esculenta HOM05D007996 ORTHO05D009821 6.5e-08 60.5 36 83.3
Actinidia25607 Actinidia chinensis HOM05D007996 ORTHO05D009821 8.5e-08 60.1 73 52.1
Phvul.009G168600 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 8.5e-08 60.1 74 52.7
Solyc06g071930.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 8.5e-08 60.1 75 53.3
Sopen06g028210 Solanum pennellii HOM05D007996 ORTHO05D009821 8.5e-08 60.1 75 53.3
Medtr4g103970 Medicago truncatula HOM05D007996 ORTHO05D009821 1.1e-07 59.7 73 53.4
Rhsim08G0186300 Rhododendron simsii HOM05D007996 ORTHO05D009821 1.5e-07 59.3 37 78.4
Cpa.g.sc4.79 Carica papaya HOM05D007996 ORTHO05D009821 1.9e-07 58.9 36 80.6
Glyma.17G127600 Glycine max HOM05D007996 ORTHO05D009821 1.9e-07 58.9 71 54.9
Manes.06G116300 Manihot esculenta HOM05D007996 ORTHO05D009821 2.5e-07 58.5 36 80.6
Potri.015G091300 Populus trichocarpa HOM05D007996 ORTHO05D009821 2.5e-07 58.5 36 83.3
CSS0022418 Camellia sinensis var. sinensis HOM05D007996 ORTHO05D009821 3.2e-07 58.2 38 73.7
Phvul.003G208700 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 3.2e-07 58.2 73 53.4
Prupe.5G156000 Prunus persica HOM05D007996 ORTHO05D009821 3.2e-07 58.2 73 52.1
Lj4g0006448 Lotus japonicus HOM05D007996 ORTHO05D009821 5.5e-07 57.4 73 49.3
PGR044G0405 Punica granatum HOM05D007996 ORTHO05D009821 5.5e-07 57.4 71 47.9
Lalb_Chr07g0183251 Lupinus albus HOM05D007996 ORTHO05D009821 7.2e-07 57.0 73 52.1
Haze_07260 Corylus avellana HOM05D007996 ORTHO05D009821 9.4e-07 56.6 73 52.1
Glyma.04G193300 Glycine max HOM05D007996 ORTHO05D009821 1.2e-06 56.2 74 50.0
Actinidia16189 Actinidia chinensis HOM05D007996 ORTHO05D009821 1.6e-06 55.8 36 80.6
EL10Ac7g18091 Beta vulgaris HOM05D007996 ORTHO05D009821 1.6e-06 55.8 77 50.6
Duzib084G1431 Durio zibethinus HOM05D007996 ORTHO05D009821 1.6e-06 55.8 71 53.5
Psat4g063440 Pisum sativum HOM05D007996 ORTHO05D009821 1.6e-06 55.8 73 50.7
CiPaw.11G011200 Carya illinoinensis HOM05D007996 ORTHO05D009821 3.6e-06 54.7 74 52.7
Hma1.2p1_0014F.1_g009860 Hydrangea macrophylla HOM05D007996 ORTHO05D009821 4.7e-06 54.3 75 46.7
Peaxi162Scf00089g00319 Petunia axillaris HOM05D007996 ORTHO05D009821 4.7e-06 54.3 69 52.2
TPR.G40415 Trifolium pratense HOM05D007996 ORTHO05D009821 4.7e-06 54.3 73 49.3
Solyc03g110990.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 6.1e-06 53.9 71 47.9


User provided reference genes

Program Settings