Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1098700 Malus domestica HOM05D005566 ORTHO05D007534 6.6e-194 680.6 373 100.0
MD06G1077900 Malus domestica HOM05D005566 ORTHO05D007534 1.3e-133 480.3 392 71.9
Prupe.5G095700 Prunus persica HOM05D005566 ORTHO05D007534 2.3e-114 416.4 399 63.4
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 2.9e-80 303.1 453 47.5
RcHm_v2.0_Chr7g0198431 Rosa chinensis HOM05D005566 ORTHO05D007534 1.1e-79 301.2 452 46.2
FAN04G1912 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.6e-75 287.3 454 45.8
FvH4_5g01950 Fragaria vesca HOM05D005566 ORTHO05D007534 1.8e-74 283.9 454 45.2
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 2.6e-73 280.0 454 44.9
CSS0044378 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 2.4e-58 230.3 420 41.7
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 2.2e-56 223.8 454 39.9
Dinv38972 Davidia involucrata HOM05D005566 ORTHO05D007534 3.8e-56 223.0 415 41.0
Thecc.03G275300 Theobroma cacao HOM05D005566 ORTHO05D007534 3.0e-53 213.4 393 41.0
QL12p018066 Quercus lobata HOM05D005566 ORTHO05D007534 5.1e-53 212.6 368 41.8
Manes.02G024200 Manihot esculenta HOM05D005566 ORTHO05D007534 8.7e-53 211.8 410 38.0
Gohir.D12G229000 Gossypium hirsutum HOM05D005566 ORTHO05D007534 8.2e-51 205.3 406 39.7
Gorai.008G245200 Gossypium raimondii HOM05D005566 ORTHO05D007534 3.1e-50 203.4 406 39.2
Gohir.A12G226600 Gossypium hirsutum HOM05D005566 ORTHO05D007534 5.3e-50 202.6 406 39.4
CANSAT21G2631 Cannabis sativa HOM05D005566 ORTHO05D007534 9.0e-50 201.8 404 38.6
Duzib084G0536 Durio zibethinus HOM05D005566 ORTHO05D007534 1.5e-49 201.1 406 39.2
Cfa012142 Carpinus fangiana HOM05D005566 ORTHO05D007534 3.2e-47 193.4 368 40.2
Haze_08893 Corylus avellana HOM05D005566 ORTHO05D007534 5.5e-47 192.6 397 39.0
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 7.2e-47 192.2 398 38.2
Sabra03G0087800 Salix brachista HOM05D005566 ORTHO05D007534 1.2e-46 191.4 403 36.2
Glyma.08G012600 Glycine max HOM05D005566 ORTHO05D007534 4.6e-46 189.5 369 37.7
PGR031G0987 Punica granatum HOM05D005566 ORTHO05D007534 4.6e-46 189.5 323 40.9
Atru.chr9.204 Acer truncatum HOM05D005566 ORTHO05D007534 1.4e-45 188.0 341 38.7
Eucgr.D01874 Eucalyptus grandis HOM05D005566 ORTHO05D007534 3.0e-45 186.8 358 38.8
Potri.003G124200 Populus trichocarpa HOM05D005566 ORTHO05D007534 7.4e-44 182.2 405 36.0
CARHR013110 Cardamine hirsuta HOM05D005566 ORTHO05D007534 9.7e-44 181.8 407 37.1
THA.LOC104809401 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 1.7e-43 181.0 387 35.1
Ciclev10024399m.g Citrus clementina HOM05D005566 ORTHO05D007534 2.2e-43 180.6 360 37.2
Cc08_g14350 Coffea canephora HOM05D005566 ORTHO05D007534 4.8e-43 179.5 405 34.8
Carub.0001s1252 Capsella rubella HOM05D005566 ORTHO05D007534 6.3e-43 179.1 213 48.8
VMungo0251G1600 Vigna mungo HOM05D005566 ORTHO05D007534 8.2e-43 178.7 363 38.6
Lalb_Chr09g0333291 Lupinus albus HOM05D005566 ORTHO05D007534 1.1e-42 178.3 416 36.3
Cpa.g.sc76.21 Carica papaya HOM05D005566 ORTHO05D007534 1.8e-42 177.6 404 38.4
Sed0016580 Sechium edule HOM05D005566 ORTHO05D007534 1.8e-42 177.6 391 35.8
Aa31LG1G1950 Aethionema arabicum HOM05D005566 ORTHO05D007534 1.5e-41 174.5 316 38.9
Actinidia02022 Actinidia chinensis HOM05D005566 ORTHO05D007534 4.5e-41 172.9 462 33.1
Nn6g33532 Nelumbo nucifera HOM05D005566 ORTHO05D007534 4.5e-41 172.9 233 45.9
Sp1g11360 Schrenkiella parvula HOM05D005566 ORTHO05D007534 4.5e-41 172.9 379 36.4
AL1G24430 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 7.7e-41 172.2 215 47.0
Thhalv10006889m.g Eutrema salsugineum HOM05D005566 ORTHO05D007534 1.3e-40 171.4 386 35.2
AT1G12800 Arabidopsis thaliana HOM05D005566 ORTHO05D007534 1.7e-40 171.0 272 42.6
A06p08880 Brassica napus HOM05D005566 ORTHO05D007534 2.2e-40 170.6 333 37.5
GSVIVG01019806001 Vitis vinifera HOM05D005566 ORTHO05D007534 2.2e-40 170.6 370 35.7
BcaC05g25155 Brassica carinata HOM05D005566 ORTHO05D007534 3.8e-40 169.9 379 35.6
ClCG01G002940 Citrullus lanatus HOM05D005566 ORTHO05D007534 3.8e-40 169.9 394 34.3
TAR629G1018 Trochodendron aralioides HOM05D005566 ORTHO05D007534 3.8e-40 169.9 436 34.6
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 3.2e-39 166.8 411 35.8
Sopen08g003840 Solanum pennellii HOM05D005566 ORTHO05D007534 3.2e-39 166.8 217 47.0
C05p10500 Brassica napus HOM05D005566 ORTHO05D007534 4.2e-39 166.4 351 36.2
BolC5t29796H Brassica oleracea HOM05D005566 ORTHO05D007534 4.2e-39 166.4 351 36.2
EL10Ac5g12770 Beta vulgaris HOM05D005566 ORTHO05D007534 7.2e-39 165.6 416 36.3
TWI81G0928 Tripterygium wilfordii HOM05D005566 ORTHO05D007534 7.2e-39 165.6 391 35.0
Peaxi162Scf00102g01550 Petunia axillaris HOM05D005566 ORTHO05D007534 9.4e-39 165.2 200 50.0
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 2.7e-38 163.7 411 35.5
Duzib205G0430 Durio zibethinus HOM05D005566 ORTHO05D007534 2.7e-38 163.7 403 36.0
CAN.G792.89 Capsicum annuum HOM05D005566 ORTHO05D007534 1.0e-37 161.8 345 36.2
Lj2A187T86 Lonicera japonica HOM05D005566 ORTHO05D007534 6.7e-37 159.1 337 37.4
BcaC05g25112 Brassica carinata HOM05D005566 ORTHO05D007534 1.5e-36 157.9 400 36.0
Solyc08g007950.3 Solanum lycopersicum HOM05D005566 ORTHO05D007534 1.5e-36 157.9 392 33.4
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 2.6e-36 157.1 392 34.4
MELO3C005651.2 Cucumis melo HOM05D005566 ORTHO05D007534 3.3e-36 156.8 391 34.5
CiPaw.12G095300 Carya illinoinensis HOM05D005566 ORTHO05D007534 5.7e-36 156.0 321 38.3
Glyma.05G205700 Glycine max HOM05D005566 ORTHO05D007534 5.7e-36 156.0 242 42.6
BraA06t24082Z Brassica rapa HOM05D005566 ORTHO05D007534 2.8e-35 153.7 404 32.9
Nitab4.5_0001200g0190 Nicotiana tabacum HOM05D005566 ORTHO05D007534 2.8e-35 153.7 234 42.7
Sc22g0000210 Simmondsia chinensis HOM05D005566 ORTHO05D007534 2.8e-35 153.7 421 36.6
MSTRG.11999 Avicennia marina HOM05D005566 ORTHO05D007534 3.7e-35 153.3 405 33.8
Phvul.002G287600 Phaseolus vulgaris HOM05D005566 ORTHO05D007534 6.3e-35 152.5 360 37.5
SalBow5G3774 Salvia bowleyana HOM05D005566 ORTHO05D007534 1.5e-33 147.9 311 36.3
AUR62010607 Chenopodium quinoa HOM05D005566 ORTHO05D007534 5.9e-33 146.0 431 33.6
Lj4g0021136 Lotus japonicus HOM05D005566 ORTHO05D007534 2.9e-32 143.7 391 33.2
Oeu049553.1 Olea europaea HOM05D005566 ORTHO05D007534 8.5e-32 142.1 405 32.1
Medtr8g097290 Medicago truncatula HOM05D005566 ORTHO05D007534 5.5e-31 139.4 236 41.9
Hund11490 Selenicereus undatus HOM05D005566 ORTHO05D007534 5.5e-31 139.4 338 35.5
Actinidia14546 Actinidia chinensis HOM05D005566 ORTHO05D007534 7.2e-31 139.0 182 45.1
Ah.12g057290 Amaranthus hybridus HOM05D005566 ORTHO05D007534 1.2e-30 138.3 405 34.3
AUR62017248 Chenopodium quinoa HOM05D005566 ORTHO05D007534 1.6e-30 137.9 452 33.4
SalBow6G1897 Salvia bowleyana HOM05D005566 ORTHO05D007534 6.1e-30 136.0 457 30.0
SGA_v2.0_scaffold253G45116 Striga asiatica HOM05D005566 ORTHO05D007534 8.0e-30 135.6 446 30.5
DCAR_008409 Daucus carota HOM05D005566 ORTHO05D007534 6.7e-29 132.5 237 38.4
TPR.G12738 Trifolium pratense HOM05D005566 ORTHO05D007534 2.8e-27 127.1 224 39.7
Hma1.2p1_1943F.1_g308460 Hydrangea macrophylla HOM05D005566 ORTHO05D007534 4.1e-26 123.2 322 32.0
Psat7g035520 Pisum sativum HOM05D005566 ORTHO05D007534 2.6e-25 120.6 299 38.1
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 1.3e-24 118.2 348 30.5
Ca_17550_v3 Cicer arietinum L. HOM05D005566 ORTHO05D007534 3.8e-24 116.7 347 36.0
CDE05G3632 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 5.0e-24 116.3 284 33.8
unitig_744.g24358 Utricularia gibba HOM05D005566 ORTHO05D007534 6.5e-24 115.9 258 36.4
ECA233G6007 Erigeron canadensis HOM05D005566 ORTHO05D007534 1.5e-23 114.8 242 35.5
HanXRQChr02g0048911 Helianthus annuus HOM05D005566 ORTHO05D007534 1.5e-23 114.8 236 34.3
PSO782G1537 Papaver somniferum HOM05D005566 ORTHO05D007534 5.5e-23 112.8 273 34.8
CDE08G0014 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 4.7e-22 109.8 345 29.0
Migut.A00792 Erythranthe guttata HOM05D005566 ORTHO05D007534 8.0e-22 109.0 356 31.5
PSO063G1293 Papaver somniferum HOM05D005566 ORTHO05D007534 1.8e-21 107.8 418 29.4
Nitab4.5_0004032g0020 Nicotiana tabacum HOM05D005566 ORTHO05D007534 6.7e-21 105.9 235 34.9
Lsat_1_v5_gn_6_5820 Lactuca sativa HOM05D005566 ORTHO05D007534 1.2e-20 105.1 258 31.4
vmacro11305 Vaccinium macrocarpon HOM05D005566 ORTHO05D007534 2.0e-20 104.4 375 30.9
ATR0680G084 Amborella trichopoda HOM05D005566 ORTHO05D007534 1.7e-19 101.3 218 34.9
HPP92_014799 Vanilla planifolia HOM05D005566 ORTHO05D007534 2.4e-18 97.4 197 34.5
HPP92_014800 Vanilla planifolia HOM05D005566 ORTHO05D007534 2.2e-16 90.9 192 34.9
Aqoxy5G04022 Aquilegia oxysepala HOM05D005566 ORTHO05D007534 6.5e-16 89.4 274 36.5
DCAR_004649 Daucus carota HOM05D005566 ORTHO05D007534 4.8e-11 73.2 345 26.4
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 9.1e-10 68.9 164 36.0
Os02g0115600 Oryza sativa ssp. japonica HOM05D005566 ORTHO05D007534 4.5e-09 66.6 69 46.4
Zm00001eb229900 Zea mays HOM05D005566 ORTHO05D007534 5.9e-09 66.2 61 50.8
Lsat_1_v5_gn_3_7621 Lactuca sativa HOM05D005566 ORTHO05D007534 9.5e-07 58.9 256 25.4
Pp3c15_23440 Physcomitrium patens HOM05D005566 ORTHO05D007534 9.5e-07 58.9 67 46.3
Mapoly0023s0130 Marchantia polymorpha HOM05D005566 ORTHO05D007534 2.8e-06 57.4 48 52.1


User provided reference genes

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