Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 6.2e-143 510.8 253 100.0
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 2.1e-114 416.0 246 87.4
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 1.4e-81 307.0 238 68.9
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 9.7e-64 247.7 244 54.9
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.2e-63 246.5 244 54.1
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 8.2e-63 244.6 244 53.7
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.8e-62 243.4 242 53.7
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.0e-60 237.7 242 52.9
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.2e-60 236.5 244 52.5
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 2.6e-56 223.0 249 52.6
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 1.1e-54 217.6 252 49.2
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 5.0e-52 208.8 253 49.8
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 7.2e-51 204.9 256 48.4
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 2.8e-50 203.0 251 50.2
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 1.2e-45 187.6 245 45.7
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 3.5e-45 186.0 249 49.0
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 5.0e-44 182.2 246 42.7
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 1.6e-42 177.2 243 45.3
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 8.0e-42 174.9 245 46.5
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.8e-41 173.7 239 41.8
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 1.2e-40 171.0 255 45.1
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.0e-40 170.2 245 43.3
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 5.8e-40 168.7 238 42.9
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.3e-39 167.5 238 40.8
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 6.0e-37 158.7 255 44.3
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 7.8e-37 158.3 272 40.1
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 8.6e-36 154.8 252 41.7
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 2.8e-34 149.8 243 39.1
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.4e-32 142.9 283 37.1
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 3.4e-32 142.9 264 40.2
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 4.4e-32 142.5 243 38.7
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 1.3e-31 141.0 230 38.7
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 9.2e-30 134.8 239 38.1
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 3.5e-29 132.9 255 38.8
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 4.6e-29 132.5 244 38.9
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 7.8e-29 131.7 248 38.7
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 1.3e-28 131.0 228 37.3
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.7e-28 130.6 256 38.3
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 4.3e-27 125.9 256 35.2
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 9.5e-27 124.8 254 35.4
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 3.6e-26 122.9 250 36.0
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 5.2e-25 119.0 244 34.0
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 3.4e-24 116.3 263 33.8
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 7.5e-24 115.2 275 32.7
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 9.9e-24 114.8 285 31.9
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 9.9e-24 114.8 248 33.5
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 4.9e-23 112.5 273 33.3
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 6.4e-23 112.1 273 33.3
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 3.2e-22 109.8 261 34.5
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.6e-21 107.5 269 34.2
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 3.5e-21 106.3 279 31.9
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 4.6e-21 105.9 242 33.1
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 4.6e-21 105.9 263 32.7
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 6.0e-21 105.5 248 30.2
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 6.0e-21 105.5 251 29.5
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 7.8e-21 105.1 268 34.3
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.0e-20 104.8 102 52.9
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 1.3e-20 104.4 236 31.8
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 3.9e-20 102.8 257 30.7
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 6.6e-20 102.1 246 32.5
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 6.6e-20 102.1 259 35.1
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.5e-19 100.9 259 34.4
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 2.5e-19 100.1 246 33.7
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 4.3e-19 99.4 278 28.4
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 5.6e-19 99.0 237 30.0
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 5.6e-19 99.0 256 30.9
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 7.3e-19 98.6 207 35.3
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 9.5e-19 98.2 259 31.3
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 1.2e-18 97.8 238 32.4
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.8e-18 96.7 259 30.9
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 3.6e-18 96.3 238 32.4
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 1.8e-17 94.0 233 33.0
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 2.4e-17 93.6 239 29.7
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 4.0e-17 92.8 246 30.9
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 8.9e-17 91.7 99 49.5
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 5.8e-16 89.0 238 29.4
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 1.3e-15 87.8 253 30.8
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 2.9e-15 86.7 183 33.9
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.8e-15 86.3 102 50.0
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 4.9e-15 85.9 263 30.8
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 1.9e-14 84.0 243 28.4
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 1.9e-14 84.0 259 29.3
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 1.9e-14 84.0 262 28.2
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 2.1e-13 80.5 249 28.9
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 2.1e-13 80.5 250 28.4
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 2.7e-13 80.1 254 29.1
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 6.0e-13 79.0 269 25.3
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 1.0e-12 78.2 248 28.2
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 3.0e-12 76.6 252 30.2
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 3.9e-12 76.3 266 28.6
Zm00001eb065580 Zea mays HOM05D007097 ORTHO05D008131 6.6e-12 75.5 256 28.9
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 8.7e-12 75.1 108 46.3
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 4.3e-11 72.8 240 26.7
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 1.2e-10 71.2 81 45.7
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 1.6e-10 70.9 215 28.8
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.8e-10 70.1 100 43.0
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 6.2e-10 68.9 92 43.5
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 2.6e-08 63.5 144 31.9
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 3.2e-06 56.6 131 31.3


User provided reference genes

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