Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.2e-154 548.9 270 100.0
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.3e-127 459.9 271 87.5
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.6e-120 434.9 285 77.5
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.0e-119 433.7 270 79.6
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.3e-119 433.3 270 80.4
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-117 426.0 285 76.8
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.1e-117 424.1 285 75.8
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.1e-117 424.1 278 77.3
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.2e-107 393.7 282 72.7
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.9e-105 386.3 283 71.4
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.1e-102 377.1 281 69.4
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 3.3e-102 375.6 282 69.5
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 9.6e-102 374.0 283 70.7
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.6e-101 373.2 278 69.1
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 2.1e-101 372.9 278 68.7
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 3.4e-99 365.5 229 80.8
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.9e-97 359.8 251 72.1
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 9.3e-97 357.5 308 63.6
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 1.6e-96 356.7 280 65.4
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.7e-96 355.9 278 66.5
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 6.0e-96 354.8 280 66.8
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 3.0e-95 352.4 280 67.5
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 5.1e-95 351.7 275 65.1
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 6.7e-95 351.3 283 67.1
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 8.7e-95 350.9 276 67.4
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 8.7e-95 350.9 283 66.4
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 8.7e-95 350.9 280 66.1
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 8.7e-95 350.9 279 65.2
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.9e-94 349.7 276 67.0
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.9e-94 349.7 261 68.6
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 3.3e-94 349.0 279 67.0
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 2.1e-93 346.3 283 66.8
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 2.8e-93 345.9 290 64.8
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 3.7e-93 345.5 201 83.1
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 6.2e-93 344.7 283 66.1
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.1e-92 344.0 269 66.2
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 2.4e-92 342.8 247 71.7
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 5.3e-92 341.7 279 64.9
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 6.9e-92 341.3 219 77.2
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 9.0e-92 340.9 283 64.0
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.2e-91 340.5 275 66.5
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.5e-91 340.1 200 82.5
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 2.0e-91 339.7 266 64.3
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.4e-91 339.0 274 65.3
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 5.8e-91 338.2 219 75.8
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 5.8e-91 338.2 272 65.8
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 7.6e-91 337.8 288 64.9
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.7e-90 336.7 279 64.9
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 8.4e-90 334.3 274 65.7
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 8.4e-90 334.3 274 63.9
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.1e-89 334.0 282 62.4
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 1.9e-89 333.2 277 64.3
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 3.2e-89 332.4 267 64.8
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.6e-88 330.1 270 64.4
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.6e-88 330.1 256 66.8
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.1e-88 329.7 255 66.7
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 2.7e-88 329.3 202 78.7
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 3.5e-88 328.9 256 66.4
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 4.6e-88 328.6 278 61.9
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.3e-87 327.0 277 63.5
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.3e-87 327.0 280 62.5
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.8e-87 326.6 261 65.1
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.3e-87 326.2 282 64.5
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 3.0e-87 325.9 258 66.3
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.1e-86 323.9 282 61.0
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 2.5e-86 322.8 210 75.7
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.5e-86 322.8 275 64.4
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 7.4e-86 321.2 263 64.3
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 2.2e-85 319.7 297 58.9
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.7e-85 318.9 235 70.2
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 8.2e-85 317.8 250 66.4
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.4e-84 317.0 244 66.4
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 1.4e-84 317.0 226 71.7
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 2.4e-84 316.2 183 83.1
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 4.1e-84 315.5 196 79.1
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 6.9e-84 314.7 272 62.1
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 2.0e-83 313.2 219 71.2
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 2.6e-83 312.8 277 59.2
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 4.5e-83 312.0 272 61.0
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.0e-82 310.8 281 61.6
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 1.3e-82 310.5 220 70.0
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.3e-82 310.5 273 61.9
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 1.7e-82 310.1 220 70.5
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 1.7e-82 310.1 220 70.5
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 1.7e-82 310.1 220 70.5
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 5.0e-82 308.5 190 78.9
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 6.5e-82 308.1 220 69.1
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 6.5e-82 308.1 219 68.9
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 1.6e-80 303.5 193 77.7
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 2.7e-80 302.8 219 69.4
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.0e-79 300.8 189 76.2
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 2.5e-78 296.2 194 73.2
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 5.7e-78 295.0 180 77.2
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 2.2e-74 283.1 253 56.9
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 8.5e-74 281.2 267 59.6
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.4e-73 280.4 267 59.6
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.4e-73 280.4 286 57.7
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 2.1e-72 276.6 244 59.8
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 3.7e-69 265.8 167 77.2
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.7e-61 240.4 185 61.1
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 9.1e-60 234.6 185 59.5
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.5e-49 199.9 160 61.9
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.2e-49 199.1 121 81.0
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 4.7e-48 195.7 178 54.5
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 2.4e-44 183.3 103 83.5
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.3e-33 146.0 93 75.3
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.9e-29 132.5 81 79.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 2.5e-25 120.2 157 45.9
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 5.6e-25 119.0 84 66.7
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.3e-21 105.1 136 49.3
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 5.2e-15 85.9 152 31.6
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 2.2e-13 80.5 114 39.5
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.3e-10 70.5 99 42.4
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.1e-07 61.6 128 39.8
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 2.0e-06 57.4 35 80.0


User provided reference genes

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