Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 2.5e-231 805.1 407 100.0
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 1.3e-190 669.8 407 84.8
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 1.3e-166 590.1 407 75.7
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 5.1e-163 578.2 411 72.7
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 2.1e-161 572.8 369 78.3
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 8.1e-161 570.9 407 73.7
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 1.4e-160 570.1 408 72.8
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 2.4e-160 569.3 384 76.8
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 3.1e-160 568.9 384 76.3
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 2.6e-159 565.8 437 68.6
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 2.6e-159 565.8 374 74.3
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 4.4e-159 565.1 414 71.7
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 5.8e-159 564.7 408 71.1
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 2.9e-158 562.4 378 75.4
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 4.9e-158 561.6 376 76.1
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 6.4e-158 561.2 377 75.9
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 1.9e-157 559.7 396 73.0
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 1.9e-157 559.7 377 75.6
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 2.4e-157 559.3 437 68.2
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 3.2e-157 558.9 408 70.8
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 1.2e-156 557.0 370 77.0
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 4.6e-156 555.1 410 70.0
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 6.0e-156 554.7 392 73.0
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 1.1e-154 550.4 419 69.7
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 1.5e-154 550.1 409 70.2
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 2.8e-153 545.8 408 68.9
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 2.8e-153 545.8 376 73.7
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 6.2e-153 544.7 406 71.2
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 6.9e-152 541.2 411 68.1
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 9.0e-152 540.8 412 69.7
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 9.9e-151 537.3 412 68.2
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 2.9e-150 535.8 413 69.0
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 8.4e-150 534.3 409 69.4
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 1.1e-149 533.9 377 73.5
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 4.2e-149 531.9 425 66.1
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 1.5e-146 523.5 396 69.7
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 5.6e-146 521.5 414 66.9
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 5.6e-146 521.5 438 65.5
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 7.3e-146 521.2 377 71.6
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 1.6e-145 520.0 379 69.7
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 2.8e-145 519.2 380 70.0
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 4.8e-145 518.5 408 65.7
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 4.8e-145 518.5 354 74.0
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 4.8e-145 518.5 377 72.1
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 1.1e-144 517.3 383 68.4
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 2.4e-144 516.2 413 65.4
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 9.0e-144 514.2 411 65.9
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 9.0e-144 514.2 380 69.2
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 2.0e-143 513.1 368 72.3
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 1.7e-142 510.0 423 65.0
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 2.2e-142 509.6 380 68.9
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 3.8e-142 508.8 379 68.3
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 6.4e-142 508.1 380 68.9
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 8.4e-142 507.7 445 61.8
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 1.4e-141 506.9 383 68.4
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 2.4e-141 506.1 378 69.0
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 3.2e-141 505.8 287 86.4
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 3.2e-141 505.8 379 68.1
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 4.2e-141 505.4 384 69.5
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 7.1e-141 504.6 383 68.1
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 7.1e-141 504.6 383 68.1
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 9.3e-141 504.2 379 68.3
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 9.3e-141 504.2 388 67.8
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 4.6e-140 501.9 287 84.7
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 6.0e-140 501.5 396 66.4
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 1.0e-139 500.7 368 69.8
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 3.9e-139 498.8 376 68.9
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 3.3e-138 495.7 377 69.8
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 6.2e-137 491.5 372 68.3
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 8.1e-137 491.1 365 67.4
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 1.4e-136 490.3 370 67.0
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 5.3e-136 488.4 407 64.1
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 7.6e-135 484.6 287 80.8
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 9.9e-135 484.2 440 60.9
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 3.2e-133 479.2 386 64.8
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 2.1e-132 476.5 429 60.6
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 4.6e-132 475.3 366 65.8
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 6.0e-132 474.9 386 63.7
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 1.8e-131 473.4 380 65.3
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 1.8e-131 473.4 413 61.7
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 2.3e-131 473.0 342 70.8
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 3.0e-131 472.6 379 63.3
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 1.1e-130 470.7 412 60.7
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 5.6e-130 468.4 366 64.8
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 9.6e-130 467.6 396 61.9
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 1.1e-128 464.2 399 61.7
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 1.8e-128 463.4 411 58.6
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 3.1e-128 462.6 395 63.0
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 4.0e-128 462.2 396 61.6
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 1.2e-127 460.7 357 65.0
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 1.1e-125 454.1 378 61.9
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.4e-125 453.8 381 62.5
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 1.4e-125 453.8 365 65.2
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 5.5e-125 451.8 376 63.3
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 5.5e-125 451.8 373 64.3
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 1.6e-124 450.3 382 62.6
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.1e-122 444.1 396 59.8
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 1.1e-122 444.1 397 59.9
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 7.4e-122 441.4 405 59.0
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 4.8e-121 438.7 385 61.6
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 8.2e-121 438.0 394 59.9
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 1.8e-120 436.8 394 59.9
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 3.1e-120 436.0 400 59.8
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 9.0e-120 434.5 397 59.9
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 9.0e-120 434.5 287 77.0
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 1.2e-119 434.1 376 62.2
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 1.5e-119 433.7 394 59.6
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 2.6e-119 433.0 394 59.9
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 7.7e-119 431.4 381 61.7
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 1.7e-118 430.3 375 62.4
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 2.2e-118 429.9 389 62.0
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 5.0e-118 428.7 371 62.0
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 4.2e-117 425.6 503 48.9
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 1.2e-116 424.1 368 58.4
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 2.3e-115 419.9 355 62.8
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 5.1e-115 418.7 403 52.1
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 6.7e-115 418.3 393 58.5
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 1.1e-114 417.5 378 60.1
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 2.5e-114 416.4 393 58.0
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 9.7e-114 414.5 393 57.8
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 9.7e-114 414.5 290 63.8
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 9.7e-114 414.5 369 60.4
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 1.7e-113 413.7 287 73.9
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 2.8e-113 412.9 389 59.1
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 9.1e-112 407.9 375 58.9
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 1.3e-110 404.1 359 59.9
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 1.3e-110 404.1 408 53.2
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 2.2e-110 403.3 393 57.0
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 2.2e-110 403.3 391 58.3
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 2.2e-110 403.3 391 58.3
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 1.1e-109 401.0 391 58.1
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 1.1e-109 401.0 391 58.1
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 4.2e-109 399.1 391 57.8
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 5.5e-109 398.7 327 66.1
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 7.4e-106 388.3 388 57.5
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 2.5e-101 373.2 352 54.3
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 2.6e-95 353.2 406 47.8
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 2.0e-90 337.0 251 67.3
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 4.1e-80 302.8 197 75.6
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 1.1e-59 235.0 324 39.5
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 2.2e-57 227.3 248 56.0
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 6.0e-55 219.2 169 65.7
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 1.1e-53 214.9 361 38.0
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 1.2e-52 211.5 160 66.2
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 4.9e-49 199.5 316 41.8
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 3.0e-30 137.1 123 57.7
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 3.2e-24 117.1 173 43.4
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 4.2e-24 116.7 141 52.5
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 9.3e-24 115.5 72 75.0
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 1.8e-22 111.3 109 56.0
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 5.8e-18 96.3 112 49.1
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 1.4e-16 91.7 289 26.3
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 2.1e-15 87.8 56 73.2


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