Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 1.9e-273 945.3 482 100.0
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 5.9e-126 455.3 484 52.1
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 2.6e-113 413.3 482 47.5
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 4.5e-110 402.5 482 46.5
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 2.2e-109 400.2 482 46.9
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 2.5e-108 396.7 483 46.6
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 4.7e-107 392.5 483 47.4
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 1.5e-105 387.5 483 45.3
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 3.3e-105 386.3 482 44.6
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 1.3e-104 384.4 477 45.1
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 2.8e-104 383.3 483 45.5
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 2.8e-104 383.3 477 45.7
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 2.8e-104 383.3 477 45.7
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 2.8e-104 383.3 477 45.1
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 3.7e-104 382.9 483 44.7
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 4.8e-104 382.5 477 46.1
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 4.8e-104 382.5 477 46.1
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 4.8e-104 382.5 477 45.7
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 4.8e-104 382.5 477 45.7
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 4.8e-104 382.5 477 46.1
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 6.3e-104 382.1 477 46.3
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 6.3e-104 382.1 480 44.8
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 8.2e-104 381.7 477 45.5
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 8.2e-104 381.7 477 45.1
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 8.2e-104 381.7 477 45.1
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 8.2e-104 381.7 476 44.3
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 1.1e-103 381.3 477 45.9
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 2.4e-103 380.2 477 44.4
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 3.1e-103 379.8 483 44.7
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 3.1e-103 379.8 477 44.2
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 3.1e-103 379.8 483 44.1
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 4.1e-103 379.4 483 44.1
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 4.1e-103 379.4 477 44.9
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 4.1e-103 379.4 477 44.7
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 5.3e-103 379.0 477 45.3
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 5.3e-103 379.0 482 43.6
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 9.1e-103 378.3 483 43.9
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 9.1e-103 378.3 477 44.7
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 1.2e-102 377.9 483 43.5
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 1.6e-102 377.5 477 45.7
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 2.0e-102 377.1 483 44.3
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 2.0e-102 377.1 477 44.4
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 2.0e-102 377.1 477 43.8
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 2.0e-102 377.1 477 44.7
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 2.6e-102 376.7 481 44.5
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 3.5e-102 376.3 483 43.7
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 3.5e-102 376.3 483 44.1
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 4.5e-102 375.9 477 44.7
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 4.5e-102 375.9 483 44.3
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 7.7e-102 375.2 483 44.1
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.0e-101 374.8 477 44.9
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 1.3e-101 374.4 483 44.5
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 1.3e-101 374.4 483 44.5
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.7e-101 374.0 483 43.5
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.7e-101 374.0 477 44.4
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 1.7e-101 374.0 483 43.5
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 2.2e-101 373.6 477 44.2
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 2.9e-101 373.2 482 44.2
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 3.8e-101 372.9 464 45.9
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 3.8e-101 372.9 483 43.3
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 5.0e-101 372.5 479 44.3
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 6.5e-101 372.1 476 44.5
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 1.9e-100 370.5 483 43.3
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 1.9e-100 370.5 483 43.5
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 1.9e-100 370.5 479 44.7
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 1.9e-100 370.5 483 43.9
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 2.5e-100 370.2 483 43.1
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 3.2e-100 369.8 476 43.9
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 5.5e-100 369.0 477 43.8
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 5.5e-100 369.0 458 45.2
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 5.5e-100 369.0 482 43.4
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 5.5e-100 369.0 483 43.9
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 7.2e-100 368.6 477 43.8
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 9.4e-100 368.2 478 44.1
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 1.6e-99 367.5 477 44.4
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 1.6e-99 367.5 483 43.3
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 3.6e-99 366.3 483 43.1
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 4.7e-99 365.9 477 43.6
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 4.7e-99 365.9 483 43.5
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 1.0e-98 364.8 483 43.3
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 1.4e-98 364.4 483 43.1
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 1.4e-98 364.4 477 43.2
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 1.8e-98 364.0 483 44.1
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.3e-98 363.6 458 44.8
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 2.3e-98 363.6 477 43.2
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 2.3e-98 363.6 483 43.1
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 2.3e-98 363.6 482 42.7
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 3.0e-98 363.2 477 43.0
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 1.5e-97 360.9 477 42.6
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 2.6e-97 360.1 476 41.8
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 2.6e-97 360.1 477 43.0
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 3.4e-97 359.8 476 44.5
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 4.4e-97 359.4 480 44.0
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 1.7e-96 357.5 483 43.5
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 3.7e-96 356.3 468 42.7
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.8e-95 354.0 476 43.7
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.1e-95 353.2 497 41.9
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.2e-94 351.3 460 43.5
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 5.9e-94 349.0 478 43.5
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 6.5e-93 345.5 520 41.7
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 2.5e-92 343.6 445 44.0
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.4e-90 337.8 497 41.0
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 4.0e-90 336.3 569 37.6
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 3.4e-89 333.2 483 41.2
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.3e-85 321.2 418 44.5
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 1.6e-83 314.3 444 41.7
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 1.8e-79 300.8 459 39.9
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 4.7e-75 286.2 477 37.3
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 2.2e-72 277.3 414 40.6
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 3.5e-62 243.4 278 48.6
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.1e-58 231.9 312 45.2
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 8.7e-45 185.7 477 29.6
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 3.4e-41 173.7 484 28.5
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 7.6e-41 172.6 484 28.3
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.4e-39 167.5 484 28.7
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.3e-35 155.2 491 28.3
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 5.3e-34 149.8 408 28.9
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 5.3e-34 149.8 271 37.6
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.1e-31 142.1 260 36.9
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 4.6e-30 136.7 170 45.9
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 2.1e-22 111.3 222 36.5
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 2.5e-15 87.8 92 45.7
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 2.5e-15 87.8 127 40.9
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 3.2e-15 87.4 78 52.6
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 3.2e-15 87.4 155 34.2
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.2e-14 85.5 128 39.8
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 3.4e-09 67.4 182 29.7
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 2.2e-08 64.7 101 41.6
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.9e-07 61.6 55 56.4


User provided reference genes

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