Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G095 Micromonas commoda HOM05D003361 ORTHO05D003760 4.8e-141 505.8 611 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1382 Anthoceros agrestis HOM05D003361 ORTHO05D003760 6.9e-15 86.7 218 47.2
Mapoly0032s0095 Marchantia polymorpha HOM05D003361 ORTHO05D003760 2.7e-11 74.7 195 31.3
Zm00001eb078100 Zea mays HOM05D003361 ORTHO05D003760 4.7e-11 73.9 88 43.2
Os04g0503500 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 3.9e-10 70.9 88 40.9
Aa31LG7G360 Aethionema arabicum HOM05D003361 ORTHO05D003760 1.1e-09 69.3 94 38.3
vmacro16874 Vaccinium macrocarpon HOM05D003361 ORTHO05D003760 1.1e-09 69.3 178 51.7
MSTRG.22764 Avicennia marina HOM05D003361 ORTHO05D003760 2.6e-09 68.2 86 39.5
BcaC05g25516 Brassica carinata HOM05D003361 ORTHO05D003760 2.6e-09 68.2 86 38.4
C05p13880 Brassica napus HOM05D003361 ORTHO05D003760 2.6e-09 68.2 86 38.4
BolC5t30122H Brassica oleracea HOM05D003361 ORTHO05D003760 2.6e-09 68.2 86 38.4
Zm00001eb247040 Zea mays HOM05D003361 ORTHO05D003760 2.6e-09 68.2 202 44.6
Nitab4.5_0002322g0060 Nicotiana tabacum HOM05D003361 ORTHO05D003760 4.4e-09 67.4 86 39.5
AT1G15740 Arabidopsis thaliana HOM05D003361 ORTHO05D003760 7.4e-09 66.6 94 36.2
A06p11730 Brassica napus HOM05D003361 ORTHO05D003760 7.4e-09 66.6 86 37.2
BraA06t24343Z Brassica rapa HOM05D003361 ORTHO05D003760 7.4e-09 66.6 86 37.2
Os02g0613200 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 7.4e-09 66.6 86 38.4
Rhsim12G0189300 Rhododendron simsii HOM05D003361 ORTHO05D003760 7.4e-09 66.6 198 48.0
AL1G27850 Arabidopsis lyrata HOM05D003361 ORTHO05D003760 9.7e-09 66.2 86 37.2
Sp1g14030 Schrenkiella parvula HOM05D003361 ORTHO05D003760 1.3e-08 65.9 94 37.2
Thhalv10007169m.g Eutrema salsugineum HOM05D003361 ORTHO05D003760 1.7e-08 65.5 94 36.2
MD17G1217000 Malus domestica HOM05D003361 ORTHO05D003760 1.7e-08 65.5 188 45.7
Nitab4.5_0001017g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 1.7e-08 65.5 86 38.4
Solyc03g117420.4 Solanum lycopersicum HOM05D003361 ORTHO05D003760 1.7e-08 65.5 86 39.5
Sopen03g036300 Solanum pennellii HOM05D003361 ORTHO05D003760 1.7e-08 65.5 86 39.5
PGR031G1162 Punica granatum HOM05D003361 ORTHO05D003760 2.8e-08 64.7 86 37.2
SEGI_28212 Sequoiadendron giganteum HOM05D003361 ORTHO05D003760 2.8e-08 64.7 178 47.2
ATR0767G175 Amborella trichopoda HOM05D003361 ORTHO05D003760 3.7e-08 64.3 86 37.2
arahy.Tifrunner.gnm1.ann1.MWAB5B Arachis hypogaea HOM05D003361 ORTHO05D003760 3.7e-08 64.3 186 48.9
AUR62020008 Chenopodium quinoa HOM05D003361 ORTHO05D003760 3.7e-08 64.3 86 39.5
SalBow7G0810 Salvia bowleyana HOM05D003361 ORTHO05D003760 3.7e-08 64.3 86 37.2
SalBow7G3482 Salvia bowleyana HOM05D003361 ORTHO05D003760 3.7e-08 64.3 86 37.2
Migut.I00738 Erythranthe guttata HOM05D003361 ORTHO05D003760 4.8e-08 63.9 86 37.2
THA.LOC104808198 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 4.8e-08 63.9 86 36.0
CAN.G407.25 Capsicum annuum HOM05D003361 ORTHO05D003760 6.3e-08 63.5 86 38.4
AUR62011226 Chenopodium quinoa HOM05D003361 ORTHO05D003760 6.3e-08 63.5 86 38.4
COL.COLO4_11855 Corchorus olitorius HOM05D003361 ORTHO05D003760 6.3e-08 63.5 91 36.3
Peaxi162Scf00332g00127 Petunia axillaris HOM05D003361 ORTHO05D003760 6.3e-08 63.5 86 39.5
CARHR016230 Cardamine hirsuta HOM05D003361 ORTHO05D003760 8.2e-08 63.2 94 33.0
CiPaw.02G158600 Carya illinoinensis HOM05D003361 ORTHO05D003760 8.2e-08 63.2 86 38.4
HanXRQChr17g0570311 Helianthus annuus HOM05D003361 ORTHO05D003760 8.2e-08 63.2 86 36.0
Cc04_g04660 Coffea canephora HOM05D003361 ORTHO05D003760 1.1e-07 62.8 86 36.0
QL05p032608 Quercus lobata HOM05D003361 ORTHO05D003760 1.1e-07 62.8 93 36.6
Carub.0001s1551 Capsella rubella HOM05D003361 ORTHO05D003760 1.4e-07 62.4 94 35.1
Gohir.D10G079000 Gossypium hirsutum HOM05D003361 ORTHO05D003760 1.4e-07 62.4 89 38.2
Gorai.011G085800 Gossypium raimondii HOM05D003361 ORTHO05D003760 1.4e-07 62.4 89 38.2
MELO3C023445.2 Cucumis melo HOM05D003361 ORTHO05D003760 1.8e-07 62.0 198 22.7
Duzib160G0541 Durio zibethinus HOM05D003361 ORTHO05D003760 1.8e-07 62.0 85 38.8
Gohir.A10G072100 Gossypium hirsutum HOM05D003361 ORTHO05D003760 1.8e-07 62.0 89 38.2
Oeu029903.1 Olea europaea HOM05D003361 ORTHO05D003760 1.8e-07 62.0 86 37.2
Pp3c4_3150 Physcomitrium patens HOM05D003361 ORTHO05D003760 1.8e-07 62.0 167 50.3
THA.LOC104812464 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 1.8e-07 62.0 94 35.1
TWI32G1011 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 2.4e-07 61.6 86 39.5
Actinidia15974 Actinidia chinensis HOM05D003361 ORTHO05D003760 3.1e-07 61.2 86 37.2
Ah.09g224100 Amaranthus hybridus HOM05D003361 ORTHO05D003760 3.1e-07 61.2 86 38.4
ECA246G4877 Erigeron canadensis HOM05D003361 ORTHO05D003760 3.1e-07 61.2 86 36.0
Lj9A497T71 Lonicera japonica HOM05D003361 ORTHO05D003760 3.1e-07 61.2 86 37.2
Pp3c8_1510 Physcomitrium patens HOM05D003361 ORTHO05D003760 3.1e-07 61.2 168 47.6
GSVIVG01012857001 Vitis vinifera HOM05D003361 ORTHO05D003760 3.1e-07 61.2 94 31.9
CANSAT56G3261 Cannabis sativa HOM05D003361 ORTHO05D003760 4.1e-07 60.8 86 37.2
Lj4g0018391 Lotus japonicus HOM05D003361 ORTHO05D003760 4.1e-07 60.8 86 34.9
Atru.chr7.2012 Acer truncatum HOM05D003361 ORTHO05D003760 5.3e-07 60.5 102 37.3
Ciclev10025249m.g Citrus clementina HOM05D003361 ORTHO05D003760 5.3e-07 60.5 94 37.2
Haze_16605 Corylus avellana HOM05D003361 ORTHO05D003760 5.3e-07 60.5 94 35.1
Phvul.010G157600 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 5.3e-07 60.5 85 37.6
CSS0014218 Camellia sinensis var. sinensis HOM05D003361 ORTHO05D003760 7.0e-07 60.1 86 36.0
CDE05G0968 Ceratophyllum demersum HOM05D003361 ORTHO05D003760 7.0e-07 60.1 87 32.2
Dinv30637 Davidia involucrata HOM05D003361 ORTHO05D003760 7.0e-07 60.1 86 36.0
Medtr4g116170 Medicago truncatula HOM05D003361 ORTHO05D003760 7.0e-07 60.1 86 34.9
Cpa.g.sc46.67 Carica papaya HOM05D003361 ORTHO05D003760 9.1e-07 59.7 86 36.0
Eucgr.J03087 Eucalyptus grandis HOM05D003361 ORTHO05D003760 9.1e-07 59.7 86 37.2
Glyma.07G028300 Glycine max HOM05D003361 ORTHO05D003760 9.1e-07 59.7 85 37.6
Glyma.13G163500 Glycine max HOM05D003361 ORTHO05D003760 9.1e-07 59.7 86 34.9
Lsat_1_v5_gn_5_8861 Lactuca sativa HOM05D003361 ORTHO05D003760 9.1e-07 59.7 86 34.9
Potri.006G061700 Populus trichocarpa HOM05D003361 ORTHO05D003760 9.1e-07 59.7 94 37.2
Glyma.17G107400 Glycine max HOM05D003361 ORTHO05D003760 1.2e-06 59.3 86 34.9
Lalb_Chr12g0198401 Lupinus albus HOM05D003361 ORTHO05D003760 1.2e-06 59.3 94 34.0
Sabra06G0044400 Salix brachista HOM05D003361 ORTHO05D003760 1.2e-06 59.3 94 36.2
TWI75G0489 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 1.2e-06 59.3 86 34.9
Atru.chr1.2849 Acer truncatum HOM05D003361 ORTHO05D003760 1.5e-06 58.9 94 34.0
CiPaw.01G250600 Carya illinoinensis HOM05D003361 ORTHO05D003760 1.5e-06 58.9 86 36.0
COL.COLO4_33367 Corchorus olitorius HOM05D003361 ORTHO05D003760 1.5e-06 58.9 86 37.2
DCAR_025527 Daucus carota HOM05D003361 ORTHO05D003760 1.5e-06 58.9 87 33.3
HanXRQChr09g0274781 Helianthus annuus HOM05D003361 ORTHO05D003760 1.5e-06 58.9 86 37.2
SGA_v2.0_scaffold37G14747 Striga asiatica HOM05D003361 ORTHO05D003760 1.5e-06 58.9 88 35.2
Hma1.2p1_0461F.1_g157700 Hydrangea macrophylla HOM05D003361 ORTHO05D003760 2.0e-06 58.5 86 36.0
MD02G1018400 Malus domestica HOM05D003361 ORTHO05D003760 2.0e-06 58.5 86 36.0
Manes.04G108700 Manihot esculenta HOM05D003361 ORTHO05D003760 2.0e-06 58.5 94 35.1
Manes.11G061100 Manihot esculenta HOM05D003361 ORTHO05D003760 2.0e-06 58.5 86 36.0
Psat0s571g0080 Pisum sativum HOM05D003361 ORTHO05D003760 2.0e-06 58.5 86 33.7
Psat1g109200 Pisum sativum HOM05D003361 ORTHO05D003760 2.0e-06 58.5 86 33.7
TPR.G7990 Trifolium pratense HOM05D003361 ORTHO05D003760 2.0e-06 58.5 86 34.9
TAR383G0111 Trochodendron aralioides HOM05D003361 ORTHO05D003760 2.0e-06 58.5 94 35.1
arahy.Tifrunner.gnm1.ann1.JM4LQW Arachis hypogaea HOM05D003361 ORTHO05D003760 2.6e-06 58.2 93 35.5
Hund21595 Selenicereus undatus HOM05D003361 ORTHO05D003760 2.6e-06 58.2 86 36.0
arahy.Tifrunner.gnm1.ann1.NFA80P Arachis hypogaea HOM05D003361 ORTHO05D003760 3.5e-06 57.8 93 35.5
Duzib235G0043 Durio zibethinus HOM05D003361 ORTHO05D003760 3.5e-06 57.8 99 35.4
RcHm_v2.0_Chr2g0087081 Rosa chinensis HOM05D003361 ORTHO05D003760 3.5e-06 57.8 87 34.5
Hund00496 Selenicereus undatus HOM05D003361 ORTHO05D003760 3.5e-06 57.8 88 31.8
GSVIVG01017472001 Vitis vinifera HOM05D003361 ORTHO05D003760 3.5e-06 57.8 86 36.0
Gohir.D08G101300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 4.5e-06 57.4 86 36.0
Gorai.004G109300 Gossypium raimondii HOM05D003361 ORTHO05D003760 4.5e-06 57.4 86 36.0
Lsat_1_v5_gn_4_88160 Lactuca sativa HOM05D003361 ORTHO05D003988 4.5e-06 57.4 86 32.6
HPP92_017331 Vanilla planifolia HOM05D003361 ORTHO05D003760 4.5e-06 57.4 86 34.9
VMungo0331G0010 Vigna mungo HOM05D003361 ORTHO05D003760 4.5e-06 57.4 85 37.6
Aqoxy7G02456 Aquilegia oxysepala HOM05D003361 ORTHO05D003760 5.9e-06 57.0 104 30.8
arahy.Tifrunner.gnm1.ann1.H7Z4S8 Arachis hypogaea HOM05D003361 ORTHO05D003760 5.9e-06 57.0 79 38.0
arahy.Tifrunner.gnm1.ann1.T3C7Q8 Arachis hypogaea HOM05D003361 ORTHO05D003760 5.9e-06 57.0 79 38.0
EL10Ac8g18785 Beta vulgaris HOM05D003361 ORTHO05D003760 5.9e-06 57.0 86 36.0
Ca_12515_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 5.9e-06 57.0 85 36.5
MD15G1162400 Malus domestica HOM05D003361 ORTHO05D003760 5.9e-06 57.0 86 34.9
Thecc.09G137400 Theobroma cacao HOM05D003361 ORTHO05D003760 5.9e-06 57.0 86 36.0
Glyma.08G214500 Glycine max HOM05D003361 ORTHO05D003760 7.7e-06 56.6 85 36.5
Psat7g257800 Pisum sativum HOM05D003361 ORTHO05D003760 7.7e-06 56.6 85 36.5


User provided reference genes

Program Settings