Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G736 Micromonas commoda HOM05D002663 ORTHO05D002988 9.4e-240 833.2 438 100.0
HPP92_008955 Vanilla planifolia HOM05D002663 ORTHO05D002988 8.4e-31 139.0 355 32.1
Cre10.g461900 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 1.6e-29 134.8 401 30.4
Mapoly0053s0107 Marchantia polymorpha HOM05D002663 ORTHO05D002988 4.6e-29 133.3 355 31.5
FAN12G2471 Fragaria x ananassa HOM05D002663 ORTHO05D002988 1.3e-28 131.7 418 29.4
FvH4_4g03680 Fragaria vesca HOM05D002663 ORTHO05D002988 1.8e-28 131.3 418 29.4
FAN22G0078 Fragaria x ananassa HOM05D002663 ORTHO05D002988 3.0e-28 130.6 420 30.0
SMO134G0117 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 3.0e-28 130.6 355 30.4
Sp1g03240 Schrenkiella parvula HOM05D002663 ORTHO05D002988 3.9e-28 130.2 380 30.0
Ah.04g155740 Amaranthus hybridus HOM05D002663 ORTHO05D002988 5.1e-28 129.8 375 29.9
FAN17G1274 Fragaria x ananassa HOM05D002663 ORTHO05D002988 5.1e-28 129.8 420 30.0
MSTRG.21915 Avicennia marina HOM05D002663 ORTHO05D002988 1.1e-27 128.6 379 29.8
Potri.008G167400 Populus trichocarpa HOM05D002663 ORTHO05D002988 1.1e-27 128.6 352 29.8
Aa31LG1G20460 Aethionema arabicum HOM05D002663 ORTHO05D002988 1.9e-27 127.9 386 29.3
AT1G04420 Arabidopsis thaliana HOM05D002663 ORTHO05D002988 1.9e-27 127.9 380 28.9
Cc03_g05580 Coffea canephora HOM05D002663 ORTHO05D002988 2.5e-27 127.5 389 29.0
Eucgr.H03041 Eucalyptus grandis HOM05D002663 ORTHO05D002988 2.5e-27 127.5 432 28.7
Thhalv10007737m.g Eutrema salsugineum HOM05D002663 ORTHO05D002988 2.5e-27 127.5 386 28.2
CSS0029715 Camellia sinensis var. sinensis HOM05D002663 ORTHO05D002988 3.3e-27 127.1 377 29.7
Aqoxy2G03650 Aquilegia oxysepala HOM05D002663 ORTHO05D002988 4.3e-27 126.7 364 29.7
A10p02860 Brassica napus HOM05D002663 ORTHO05D002988 4.3e-27 126.7 386 29.3
BraA10t42553Z Brassica rapa HOM05D002663 ORTHO05D002988 5.7e-27 126.3 386 29.3
Oeu011504.1 Olea europaea HOM05D002663 ORTHO05D002988 5.7e-27 126.3 374 28.6
C05p02610 Brassica napus HOM05D002663 ORTHO05D002988 7.4e-27 125.9 381 29.1
BolC5t29042H Brassica oleracea HOM05D002663 ORTHO05D002988 7.4e-27 125.9 381 29.1
CAN.G374.14 Capsicum annuum HOM05D002663 ORTHO05D002988 9.7e-27 125.6 364 28.8
unitig_26.g9552 Utricularia gibba HOM05D002663 ORTHO05D002988 9.7e-27 125.6 378 29.4
Hund03041 Selenicereus undatus HOM05D002663 ORTHO05D002988 1.3e-26 125.2 389 28.5
Ciclev10005068m.g Citrus clementina HOM05D002663 ORTHO05D002988 1.6e-26 124.8 377 28.6
ATR0736G162 Amborella trichopoda HOM05D002663 ORTHO05D002988 2.2e-26 124.4 354 29.1
PGR004G1088 Punica granatum HOM05D002663 ORTHO05D002988 2.2e-26 124.4 395 28.6
Pp3c12_10890 Physcomitrium patens HOM05D002663 ORTHO05D002988 2.8e-26 124.0 359 30.1
Carub.0001s0360 Capsella rubella HOM05D002663 ORTHO05D002988 3.7e-26 123.6 382 29.1
CARHR003760 Cardamine hirsuta HOM05D002663 ORTHO05D002988 3.7e-26 123.6 389 28.3
TAR362G0984 Trochodendron aralioides HOM05D002663 ORTHO05D002988 3.7e-26 123.6 352 29.0
MELO3C001939.2 Cucumis melo HOM05D002663 ORTHO05D002988 4.8e-26 123.2 381 28.3
Migut.N00273 Erythranthe guttata HOM05D002663 ORTHO05D002988 4.8e-26 123.2 381 29.1
RcHm_v2.0_Chr4g0393301 Rosa chinensis HOM05D002663 ORTHO05D002988 4.8e-26 123.2 377 28.9
PGSC0003DMG400016293 Solanum tuberosum HOM05D002663 ORTHO05D002988 4.8e-26 123.2 364 28.6
PSO017G0007 Papaver somniferum HOM05D002663 ORTHO05D002988 6.3e-26 122.9 353 30.0
PSO063G6804 Papaver somniferum HOM05D002663 ORTHO05D002988 6.3e-26 122.9 353 29.5
Peaxi162Scf00579g00048 Petunia axillaris HOM05D002663 ORTHO05D002988 6.3e-26 122.9 364 29.4
Solyc06g053600.4 Solanum lycopersicum HOM05D002663 ORTHO05D002988 6.3e-26 122.9 364 28.6
Hma1.2p1_0992F.1_g245210 Hydrangea macrophylla HOM05D002663 ORTHO05D002988 8.2e-26 122.5 352 29.0
Lj6g0014805 Lotus japonicus HOM05D002663 ORTHO05D002988 8.2e-26 122.5 377 28.6
Sopen06g018690 Solanum pennellii HOM05D002663 ORTHO05D002988 8.2e-26 122.5 362 28.5
GSVIVG01027822001 Vitis vinifera HOM05D002663 ORTHO05D002988 1.1e-25 122.1 387 28.2
AUR62002140 Chenopodium quinoa HOM05D002663 ORTHO05D002988 1.4e-25 121.7 377 28.6
Glyma.02G005200 Glycine max HOM05D002663 ORTHO05D002988 1.4e-25 121.7 377 28.1
Os03g0611200 Oryza sativa ssp. japonica HOM05D002663 ORTHO05D002988 1.8e-25 121.3 352 30.1
TWI09G0632 Tripterygium wilfordii HOM05D002663 ORTHO05D002988 1.8e-25 121.3 355 29.3
Cpa.g.sc44.50 Carica papaya HOM05D002663 ORTHO05D002988 2.4e-25 120.9 352 28.7
Dinv29857 Davidia involucrata HOM05D002663 ORTHO05D002988 2.4e-25 120.9 375 28.8
CiPaw.01G184000 Carya illinoinensis HOM05D002663 ORTHO05D002988 3.1e-25 120.6 387 27.9
Ca_12013_v3 Cicer arietinum L. HOM05D002663 ORTHO05D002988 3.1e-25 120.6 377 28.1
CsaV3_1G005010 Cucumis sativus L. HOM05D002663 ORTHO05D002988 3.1e-25 120.6 381 27.3
Medtr1g042730 Medicago truncatula HOM05D002663 ORTHO05D002988 3.1e-25 120.6 352 28.7
CANSAT78G1183 Cannabis sativa HOM05D002663 ORTHO05D002988 4.1e-25 120.2 394 28.4
ClCG04G012670 Citrullus lanatus HOM05D002663 ORTHO05D002988 5.3e-25 119.8 389 27.8
Lalb_Chr19g0128191 Lupinus albus HOM05D002663 ORTHO05D002988 6.9e-25 119.4 379 28.2
THA.LOC104801083 Tarenaya hassleriana HOM05D002663 ORTHO05D002988 6.9e-25 119.4 379 28.2
AUR62015568 Chenopodium quinoa HOM05D002663 ORTHO05D002988 9.0e-25 119.0 377 28.4
Nn1g02781 Nelumbo nucifera HOM05D002663 ORTHO05D002988 9.0e-25 119.0 388 27.6
Actinidia39905 Actinidia chinensis HOM05D002663 ORTHO05D002988 1.2e-24 118.6 359 28.7
DCAR_024256 Daucus carota HOM05D002663 ORTHO05D002988 1.2e-24 118.6 384 27.1
Gorai.002G025500 Gossypium raimondii HOM05D002663 ORTHO05D002988 1.2e-24 118.6 354 31.1
VMungo0720G1673 Vigna mungo HOM05D002663 ORTHO05D002988 1.2e-24 118.6 356 28.4
MD16G1219600 Malus domestica HOM05D002663 ORTHO05D002988 1.5e-24 118.2 382 28.3
Phvul.007G274000 Phaseolus vulgaris HOM05D002663 ORTHO05D002988 2.0e-24 117.9 352 28.1
Gorai.002G025400 Gossypium raimondii HOM05D002663 ORTHO05D002988 2.6e-24 117.5 354 31.1
Thecc.04G256100 Theobroma cacao HOM05D002663 ORTHO05D002988 2.6e-24 117.5 377 28.1
HanXRQChr03g0091441 Helianthus annuus HOM05D002663 ORTHO05D002988 3.4e-24 117.1 381 27.6
Gohir.D01G023000 Gossypium hirsutum HOM05D002663 ORTHO05D002988 5.9e-24 116.3 351 30.2
Gohir.D01G023100 Gossypium hirsutum HOM05D002663 ORTHO05D002988 5.9e-24 116.3 345 31.0
Nitab4.5_0005627g0010 Nicotiana tabacum HOM05D002663 ORTHO05D002988 5.9e-24 116.3 364 27.7
Psat6g104760 Pisum sativum HOM05D002663 ORTHO05D002988 7.7e-24 115.9 377 27.3
Sabra08G0127600 Salix brachista HOM05D000189 ORTHO05D000474 7.7e-24 115.9 389 28.3
TPR.G25174 Trifolium pratense HOM05D002663 ORTHO05D002988 7.7e-24 115.9 378 27.8
Zm00001eb051500 Zea mays HOM05D002663 ORTHO05D002988 1.0e-23 115.5 351 28.8
EL10Ac3g05002 Beta vulgaris HOM05D002663 ORTHO05D002988 1.7e-23 114.8 352 28.1
Prupe.1G040000 Prunus persica HOM05D002663 ORTHO05D002988 3.8e-23 113.6 377 27.3
ECA240G1813 Erigeron canadensis HOM05D001289 ORTHO05D002298 6.5e-23 112.8 397 27.0
MBI07_g16927_MAGBIO Magnolia biondii HOM05D002663 ORTHO05D002988 8.5e-23 112.5 381 27.3
Sc13g0005480 Simmondsia chinensis HOM05D002663 ORTHO05D002988 8.5e-23 112.5 354 28.2
arahy.Tifrunner.gnm1.ann1.3DH906 Arachis hypogaea HOM05D002663 ORTHO05D002988 1.1e-22 112.1 380 27.6
AUR62002141 Chenopodium quinoa HOM05D002663 ORTHO05D002988 1.1e-22 112.1 377 28.4
QL06p018104 Quercus lobata HOM05D002663 ORTHO05D002988 1.1e-22 112.1 410 27.3
vmacro15444 Vaccinium macrocarpon HOM05D002663 ORTHO05D002988 1.1e-22 112.1 418 26.8
Sed0019138 Sechium edule HOM05D002663 ORTHO05D002988 1.9e-22 111.3 441 26.1
Gohir.A01G024900 Gossypium hirsutum HOM05D002663 ORTHO05D002988 2.5e-22 110.9 368 29.3
Prupe.1G039700 Prunus persica HOM05D002663 ORTHO05D002988 2.5e-22 110.9 377 27.3
arahy.Tifrunner.gnm1.ann1.93JRWW Arachis hypogaea HOM05D002663 ORTHO05D002988 3.2e-22 110.5 380 27.4
Cfa022963 Carpinus fangiana HOM05D002663 ORTHO05D002988 4.2e-22 110.2 400 25.8
COL.COLO4_15882 Corchorus olitorius HOM05D002663 ORTHO05D002988 4.2e-22 110.2 400 28.0
BcaC07g36908 Brassica carinata HOM05D002663 ORTHO05D002988 2.1e-21 107.8 383 27.7
ECA240G4022 Erigeron canadensis HOM05D002663 ORTHO05D002988 7.9e-21 105.9 373 26.0
PRCOL_00006218 Prasinoderma coloniale HOM05D002663 ORTHO05D002988 7.9e-21 105.9 361 29.9
Rhsim02G0037500 Rhododendron simsii HOM05D002663 ORTHO05D002988 1.4e-20 105.1 422 26.5
Manes.03G163800 Manihot esculenta HOM05D002663 ORTHO05D002988 1.8e-20 104.8 359 27.3
AL1G14030 Arabidopsis lyrata HOM05D002663 ORTHO05D002988 6.7e-20 102.8 305 29.2
Lj3A693T83 Lonicera japonica HOM05D002663 ORTHO05D002988 3.3e-19 100.5 279 29.4
RcHm_v2.0_Chr4g0393291 Rosa chinensis HOM05D002663 ORTHO05D002988 2.8e-18 97.4 365 27.4
Pp3c21_17600 Physcomitrium patens HOM05D002663 ORTHO05D002988 3.7e-18 97.1 372 28.2
MCO11G017 Micromonas commoda HOM05D002663 ORTHO05D002988 1.8e-17 94.7 383 29.8
Duzib151G0352 Durio zibethinus HOM05D002663 ORTHO05D002988 4.1e-17 93.6 304 28.0
Cre03.g195050 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 7.7e-16 89.4 369 27.4
SMO236G0130 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 3.8e-15 87.0 386 25.9
AagrBONN_evm.TU.Sc2ySwM_228.654 Anthoceros agrestis HOM05D002663 ORTHO05D002988 5.0e-15 86.7 338 26.6
Atru.chr4.2054 Acer truncatum HOM05D002663 ORTHO05D002988 1.1e-14 85.5 224 27.7
Lsat_1_v5_gn_5_189660 Lactuca sativa HOM05D002663 ORTHO05D002988 9.4e-14 82.4 301 25.9
Cre17.g699900 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 1.2e-13 82.0 367 23.4
Solyc09g074310.3 Solanum lycopersicum HOM05D002663 ORTHO05D002988 3.6e-13 80.5 371 24.8
ECA248G0286 Erigeron canadensis HOM05D002663 ORTHO05D002988 6.1e-13 79.7 306 27.5
HanXRQChr11g0334821 Helianthus annuus HOM05D002663 ORTHO05D002988 6.1e-13 79.7 371 24.8
Nitab4.5_0010231g0020 Nicotiana tabacum HOM05D002663 ORTHO05D002988 6.1e-13 79.7 373 24.9
Atru.chr5.1301_Atru.chr5.1302 Acer truncatum HOM05D002663 ORTHO05D002988 7.9e-13 79.3 305 25.9
unitig_744.g24628 Utricularia gibba HOM05D002663 ORTHO05D002988 1.0e-12 79.0 378 24.1
MD11G1296300 Malus domestica HOM05D002663 ORTHO05D002988 1.4e-12 78.6 309 26.9
Migut.N02124 Erythranthe guttata HOM05D002663 ORTHO05D002988 3.0e-12 77.4 382 25.1
AUR62034595 Chenopodium quinoa HOM05D002663 ORTHO05D002988 3.9e-12 77.0 378 24.3
Sopen09g029140 Solanum pennellii HOM05D002663 ORTHO05D002988 3.9e-12 77.0 371 25.1
AUR62015567 Chenopodium quinoa HOM05D002663 ORTHO05D002988 5.1e-12 76.6 367 25.1
Dinv11283 Davidia involucrata HOM05D002663 ORTHO05D002988 5.1e-12 76.6 376 25.8
PGSC0003DMG400016854 Solanum tuberosum HOM05D002663 ORTHO05D002988 5.1e-12 76.6 372 24.5
Ah.08g212770 Amaranthus hybridus HOM05D002663 ORTHO05D002988 6.7e-12 76.3 366 24.9
AUR62036674 Chenopodium quinoa HOM05D002663 ORTHO05D002988 6.7e-12 76.3 311 26.4
AUR62044300 Chenopodium quinoa HOM05D002663 ORTHO05D002988 6.7e-12 76.3 311 26.4
SGA_v2.0_scaffold31G12664 Striga asiatica HOM05D002663 ORTHO05D002988 6.7e-12 76.3 395 25.8
vmacro02520 Vaccinium macrocarpon HOM05D002663 ORTHO05D002988 1.5e-11 75.1 371 25.1
ATR0487G012 Amborella trichopoda HOM05D002663 ORTHO05D002988 2.0e-11 74.7 308 25.3
Nitab4.5_0001651g0140 Nicotiana tabacum HOM05D002663 ORTHO05D002988 2.0e-11 74.7 373 24.1
CAN.G806.1 Capsicum annuum HOM05D002663 ORTHO05D002988 3.3e-11 73.9 371 24.5
Cfa006059 Carpinus fangiana HOM05D002663 ORTHO05D002988 3.3e-11 73.9 305 23.6
Nn3g21225 Nelumbo nucifera HOM05D002663 ORTHO05D002988 3.3e-11 73.9 280 25.7
Lj1A40T82 Lonicera japonica HOM05D002663 ORTHO05D002988 7.4e-11 72.8 379 24.5
Manes.05G070100 Manihot esculenta HOM05D002663 ORTHO05D002988 7.4e-11 72.8 309 25.6
SalBow2G2285 Salvia bowleyana HOM05D002663 ORTHO05D002988 7.4e-11 72.8 279 25.8
EL10Ac8g19575 Beta vulgaris HOM05D002663 ORTHO05D002988 9.7e-11 72.4 376 24.7
QL12p023424 Quercus lobata HOM05D002663 ORTHO05D002988 9.7e-11 72.4 305 24.3
CANSAT25G2471 Cannabis sativa HOM05D002663 ORTHO05D002988 1.3e-10 72.0 309 25.6
Gohir.A11G118800 Gossypium hirsutum HOM05D002663 ORTHO05D002988 1.3e-10 72.0 303 25.1
EL10Ac5g11662 Beta vulgaris HOM05D002663 ORTHO05D002988 2.2e-10 71.2 376 24.5
Hund05368 Selenicereus undatus HOM05D002663 ORTHO05D002988 2.2e-10 71.2 271 26.9
Actinidia00709 Actinidia chinensis HOM05D002663 ORTHO05D002988 2.8e-10 70.9 379 24.8
Eucgr.K03423 Eucalyptus grandis HOM05D002663 ORTHO05D002988 3.7e-10 70.5 372 23.7
Pp3s32_220 Physcomitrium patens HOM05D000352 ORTHO05D312377 3.7e-10 70.5 381 24.9
Lj3A693G73 Lonicera japonica HOM05D002663 ORTHO05D002988 6.3e-10 69.7 311 25.7
Nitab4.5_0000302g0180 Nicotiana tabacum HOM05D002663 ORTHO05D002988 6.3e-10 69.7 188 30.3
Cpa.g.sc9.146 Carica papaya HOM05D002663 ORTHO05D002988 8.2e-10 69.3 305 26.2
Lalb_Chr13g0295491 Lupinus albus HOM05D002663 ORTHO05D002988 8.2e-10 69.3 305 25.2
Peaxi162Scf00006g03625 Petunia axillaris HOM05D002663 ORTHO05D002988 1.8e-09 68.2 280 24.6
PGR044G1923 Punica granatum HOM05D002663 ORTHO05D002988 1.8e-09 68.2 342 24.3
CBR_g12488 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-09 66.2 235 27.2
Haze_04793 Corylus avellana HOM05D002663 ORTHO05D002988 7.0e-09 66.2 327 22.3
CSS0004482 Camellia sinensis var. sinensis HOM05D002663 ORTHO05D002988 9.1e-09 65.9 281 27.0
Hma1.2p1_1651F.1_g295770 Hydrangea macrophylla HOM05D002663 ORTHO05D002988 9.1e-09 65.9 321 25.5
CBR_g34010 Chara braunii HOM05D002663 ORTHO05D002988 2.6e-08 64.3 246 27.2
PRCOL_00006155 Prasinoderma coloniale HOM05D002663 ORTHO05D002988 2.6e-08 64.3 402 23.1
Cc01_g20040 Coffea canephora HOM05D002663 ORTHO05D002988 2.2e-07 61.2 230 24.8
Pp3s96_80 Physcomitrium patens HOM05D000352 ORTHO05D000260 2.2e-07 61.2 371 24.5
Gohir.D11G123700 Gossypium hirsutum HOM05D002663 ORTHO05D002988 3.8e-07 60.5 280 23.9
Lsat_1_v5_gn_3_120601 Lactuca sativa HOM05D002663 ORTHO05D002988 3.8e-07 60.5 339 23.6
Nitab4.5_0000302g0190 Nicotiana tabacum HOM05D002663 ORTHO05D002988 5.0e-07 60.1 166 27.1
DCAR_018373 Daucus carota HOM05D002663 ORTHO05D002988 1.9e-06 58.2 372 23.4
CBR_g410 Chara braunii HOM05D002663 ORTHO05D002988 4.2e-06 57.0 266 27.1
CDE05G0856 Ceratophyllum demersum HOM05D000039 ORTHO05D002988 9.4e-06 55.8 201 24.4
CDE05G2057 Ceratophyllum demersum HOM05D002663 ORTHO05D002988 9.4e-06 55.8 251 25.1


User provided reference genes

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