Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 2.2e-120 435.6 219 100.0
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 1.4e-47 193.7 162 56.2
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 3.6e-46 189.1 161 54.7
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 8.2e-43 177.9 158 53.2
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 4.1e-42 175.6 172 49.4
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 5.3e-42 175.3 165 51.5
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 6.9e-42 174.9 159 58.5
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.2e-41 174.1 161 51.6
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.3e-40 170.6 195 45.1
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.7e-40 170.2 167 49.1
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 3.8e-40 169.1 168 52.4
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 5.0e-40 168.7 165 52.1
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 5.0e-40 168.7 175 46.9
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 6.5e-40 168.3 161 52.2
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 6.5e-40 168.3 165 49.1
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 8.5e-40 167.9 182 47.8
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 8.5e-40 167.9 175 46.9
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.1e-39 167.5 161 51.6
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 1.1e-39 167.5 161 52.2
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 1.1e-39 167.5 165 48.5
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 1.9e-39 166.8 161 52.2
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 2.5e-39 166.4 161 51.6
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 2.5e-39 166.4 210 41.9
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.5e-39 166.4 158 50.0
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 3.2e-39 166.0 163 50.3
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 5.5e-39 165.2 161 50.9
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 5.5e-39 165.2 183 44.8
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 9.4e-39 164.5 161 50.9
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 9.4e-39 164.5 165 47.9
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 9.4e-39 164.5 161 48.4
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.2e-38 164.1 179 45.3
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.6e-38 163.7 165 49.1
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.6e-38 163.7 167 45.5
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.6e-38 163.7 168 46.4
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 2.1e-38 163.3 165 46.7
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 2.1e-38 163.3 161 50.9
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.7e-38 162.9 183 44.3
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 2.7e-38 162.9 161 46.6
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 3.6e-38 162.5 165 47.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 3.6e-38 162.5 167 45.5
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 3.6e-38 162.5 165 47.9
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 4.7e-38 162.2 158 51.3
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 4.7e-38 162.2 158 50.6
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 4.7e-38 162.2 165 49.7
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 4.7e-38 162.2 174 48.9
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 6.1e-38 161.8 165 49.1
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 6.1e-38 161.8 165 50.3
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 7.9e-38 161.4 161 49.7
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.0e-37 161.0 161 49.1
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.4e-37 160.6 165 50.3
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-37 159.8 158 50.6
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.3e-37 159.8 173 46.8
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 2.3e-37 159.8 173 45.7
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 3.9e-37 159.1 158 50.6
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 6.7e-37 158.3 168 44.6
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 6.7e-37 158.3 165 49.7
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 8.8e-37 157.9 169 46.2
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 8.8e-37 157.9 165 44.8
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 8.8e-37 157.9 161 47.8
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.1e-36 157.5 179 43.0
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 2.0e-36 156.8 193 43.5
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 2.0e-36 156.8 187 43.3
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 3.3e-36 156.0 165 45.5
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 3.3e-36 156.0 165 47.9
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 5.7e-36 155.2 177 43.5
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 5.7e-36 155.2 161 47.2
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 5.7e-36 155.2 165 45.5
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 7.4e-36 154.8 168 45.8
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 9.7e-36 154.5 165 43.6
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 9.7e-36 154.5 165 43.6
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 9.7e-36 154.5 165 48.5
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.4e-34 149.8 169 45.0
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 2.4e-34 149.8 135 51.1
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 2.4e-34 149.8 137 54.7
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 3.1e-34 149.4 161 44.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 9.1e-34 147.9 185 40.0
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.2e-33 147.5 158 46.2
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 5.0e-32 142.1 163 42.3
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 4.2e-31 139.0 163 42.9
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 5.5e-31 138.7 109 59.6
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.2e-30 137.5 158 41.8
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 3.6e-30 136.0 152 43.4
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.3e-29 133.3 152 45.4
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 8.8e-29 131.3 152 44.1
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.5e-28 130.6 148 41.9
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 7.5e-28 128.3 138 47.8
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 9.7e-28 127.9 148 42.6
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 4.8e-27 125.6 185 39.5
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 4.1e-26 122.5 152 40.8
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.0e-24 117.9 89 60.7
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.3e-24 117.5 158 41.1
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.7e-24 117.1 130 43.8
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 3.8e-24 115.9 244 30.7
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 8.5e-24 114.8 132 41.7
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 2.5e-23 113.2 97 53.6
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.5e-20 104.0 106 45.3
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.0e-20 103.6 155 34.8
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.8e-19 99.8 126 40.5
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 4.1e-18 95.9 97 49.5
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.2e-17 94.4 188 34.0
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.6e-17 94.0 118 40.7
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 2.7e-17 93.2 75 57.3
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 2.7e-17 93.2 130 36.2
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.3e-16 90.9 98 46.9
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 9.5e-15 84.7 101 41.6
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 2.1e-14 83.6 114 37.7
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.8e-14 83.2 101 39.6
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 4.7e-14 82.4 105 41.0
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 6.1e-14 82.0 102 40.2
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 8.0e-14 81.6 98 41.8
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 1.4e-13 80.9 97 43.3
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 7.5e-12 75.1 102 39.2
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 5.9e-09 65.5 49 59.2
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 2.5e-07 60.1 49 55.1


User provided reference genes

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