Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G353 Micromonas commoda HOM05D003356 ORTHO05D004362 0.0e+00 1129.8 579 100.0
PRCOL_00004496 Prasinoderma coloniale HOM05D003356 ORTHO05D004362 3.0e-116 423.3 612 42.2
PRCOL_00001307 Prasinoderma coloniale HOM05D003356 ORTHO05D004362 2.2e-111 407.1 604 39.2
MCO09G800 Micromonas commoda HOM05D003356 ORTHO05D004362 9.0e-97 358.6 627 36.5
AagrBONN_evm.TU.Sc2ySwM_362.248 Anthoceros agrestis HOM05D003356 ORTHO05D004362 2.2e-95 354.0 448 40.6
Cre01.g021500 Chlamydomonas reinhardtii HOM05D003356 ORTHO05D004362 5.8e-88 329.3 706 32.7
CBR_g34641 Chara braunii HOM05D003356 ORTHO05D004362 2.1e-85 320.9 611 34.5
Mapoly0001s0233 Marchantia polymorpha HOM05D003356 ORTHO05D004362 8.1e-82 308.9 601 33.1
Pp3c9_13290 Physcomitrium patens HOM05D003356 ORTHO05D004362 1.8e-81 307.8 606 33.5
CBR_g34644 Chara braunii HOM05D003356 ORTHO05D004362 3.1e-81 307.0 608 33.2
CBR_g50441 Chara braunii HOM05D003356 ORTHO05D004362 1.5e-80 304.7 607 33.6
ATR0680G284 Amborella trichopoda HOM05D003356 ORTHO05D004362 3.7e-74 283.5 600 31.8
Zm00001eb065890 Zea mays HOM05D003356 ORTHO05D004362 1.3e-71 275.0 604 31.1
Zm00001eb198690 Zea mays HOM05D003356 ORTHO05D004362 4.2e-70 270.0 601 30.4
Eucgr.F01103 Eucalyptus grandis HOM05D003356 ORTHO05D004362 3.6e-69 266.9 600 32.0
Atru.chr2.2711 Acer truncatum HOM05D003356 ORTHO05D004362 6.1e-69 266.2 596 31.7
Sc03g0009930 Simmondsia chinensis HOM05D003356 ORTHO05D004362 1.0e-68 265.4 608 31.7
Os04g0681600 Oryza sativa ssp. japonica HOM05D003356 ORTHO05D004362 1.8e-68 264.6 606 29.7
PSO541G1226 Papaver somniferum HOM05D003356 ORTHO05D004362 3.0e-68 263.8 604 30.3
PSO675G9024 Papaver somniferum HOM05D003356 ORTHO05D004362 3.0e-68 263.8 604 30.5
Ciclev10007637m.g Citrus clementina HOM05D003356 ORTHO05D004362 5.1e-68 263.1 600 31.0
Phvul.011G150000 Phaseolus vulgaris HOM05D003356 ORTHO05D004362 5.1e-68 263.1 599 31.9
AL3G27880 Arabidopsis lyrata HOM05D003356 ORTHO05D004362 6.7e-68 262.7 605 31.1
Os04g0681400 Oryza sativa ssp. japonica HOM05D003356 ORTHO05D004362 6.7e-68 262.7 606 29.7
Prupe.4G183900 Prunus persica HOM05D003356 ORTHO05D004362 6.7e-68 262.7 598 31.9
CARHR090420 Cardamine hirsuta HOM05D003356 ORTHO05D004362 8.7e-68 262.3 605 31.2
Glyma.13G278300 Glycine max HOM05D003356 ORTHO05D004362 8.7e-68 262.3 599 32.1
Lj3g0021569 Lotus japonicus HOM05D003356 ORTHO05D004362 8.7e-68 262.3 602 31.6
Manes.03G112000 Manihot esculenta HOM05D003356 ORTHO05D004362 8.7e-68 262.3 600 31.0
VMungo1127G2063 Vigna mungo HOM05D003356 ORTHO05D004362 8.7e-68 262.3 599 32.1
CiPaw.11G172300 Carya illinoinensis HOM05D003356 ORTHO05D004362 1.1e-67 261.9 602 31.7
CsaV3_4G033780 Cucumis sativus L. HOM05D003356 ORTHO05D004362 1.5e-67 261.5 600 30.7
MD11G1246200 Malus domestica HOM05D003356 ORTHO05D004362 1.9e-67 261.2 600 31.5
Medtr8g059125 Medicago truncatula HOM05D003356 ORTHO05D004362 1.9e-67 261.2 609 30.7
TPR.G31511 Trifolium pratense HOM05D003356 ORTHO05D004362 1.9e-67 261.2 610 30.7
C05p51790 Brassica napus HOM05D003356 ORTHO05D004362 2.5e-67 260.8 600 31.2
THA.LOC104810480 Tarenaya hassleriana HOM05D003356 ORTHO05D004362 2.5e-67 260.8 551 31.9
Cfa020557 Carpinus fangiana HOM05D003356 ORTHO05D004362 4.3e-67 260.0 600 31.0
CDE04G3674 Ceratophyllum demersum HOM05D003356 ORTHO05D004362 4.3e-67 260.0 595 29.7
AT3G15380 Arabidopsis thaliana HOM05D003356 ORTHO05D004362 5.7e-67 259.6 605 31.1
GSVIVG01014366001 Vitis vinifera HOM05D003356 ORTHO05D004362 5.7e-67 259.6 596 30.9
BolC5t33865H Brassica oleracea HOM05D003356 ORTHO05D004362 7.4e-67 259.2 600 31.0
CANSAT56G0567 Cannabis sativa HOM05D003356 ORTHO05D004362 7.4e-67 259.2 598 30.3
A05p34020 Brassica napus HOM05D003356 ORTHO05D004362 9.7e-67 258.8 600 31.2
BraA05t22224Z Brassica rapa HOM05D003356 ORTHO05D004362 9.7e-67 258.8 600 31.2
PGR083G2041 Punica granatum HOM05D003356 ORTHO05D004362 9.7e-67 258.8 600 30.7
Nn1g06580 Nelumbo nucifera HOM05D003356 ORTHO05D004362 1.6e-66 258.1 600 30.7
Potri.011G121100 Populus trichocarpa HOM05D003356 ORTHO05D004362 2.2e-66 257.7 602 29.9
TAR624G0482 Trochodendron aralioides HOM05D003356 ORTHO05D004362 2.2e-66 257.7 596 31.0
Psat5g244680 Pisum sativum HOM05D003356 ORTHO05D004362 2.8e-66 257.3 595 31.6
Sp3g13630 Schrenkiella parvula HOM05D003356 ORTHO05D004362 2.8e-66 257.3 605 30.7
FvH4_3g20420 Fragaria vesca HOM05D003356 ORTHO05D004362 3.7e-66 256.9 595 31.4
Gohir.A11G283100 Gossypium hirsutum HOM05D003356 ORTHO05D004362 3.7e-66 256.9 596 30.4
Sed0005873 Sechium edule HOM05D003356 ORTHO05D004362 4.8e-66 256.5 601 30.4
C03p47660 Brassica napus HOM05D003356 ORTHO05D004362 6.3e-66 256.1 602 30.4
Carub.0003s1510 Capsella rubella HOM05D003356 ORTHO05D004362 6.3e-66 256.1 605 30.7
Migut.M00849 Erythranthe guttata HOM05D003356 ORTHO05D004362 6.3e-66 256.1 595 30.8
arahy.Tifrunner.gnm1.ann1.YA7R1N Arachis hypogaea HOM05D003356 ORTHO05D004362 8.2e-66 255.8 627 29.8
BolC3t17043H Brassica oleracea HOM05D003356 ORTHO05D004362 8.2e-66 255.8 602 30.2
Gohir.D11G296752 Gossypium hirsutum HOM05D003356 ORTHO05D004362 8.2e-66 255.8 596 30.9
Gorai.007G321200 Gossypium raimondii HOM05D003356 ORTHO05D004362 8.2e-66 255.8 596 30.9
Glyma.12G150800 Glycine max HOM05D003356 ORTHO05D004362 1.1e-65 255.4 602 31.9
RcHm_v2.0_Chr5g0034311 Rosa chinensis HOM05D003356 ORTHO05D004362 1.4e-65 255.0 598 31.4
Glyma.12G223200 Glycine max HOM05D003356 ORTHO05D004362 1.8e-65 254.6 600 31.8
HanXRQChr11g0328451 Helianthus annuus HOM05D003356 ORTHO05D004362 1.8e-65 254.6 601 31.4
Nitab4.5_0001551g0030 Nicotiana tabacum HOM05D003356 ORTHO05D004362 1.8e-65 254.6 597 30.7
Nitab4.5_0003688g0040 Nicotiana tabacum HOM05D003356 ORTHO05D004362 1.8e-65 254.6 597 30.8
Solyc07g063230.3 Solanum lycopersicum HOM05D003356 ORTHO05D004362 1.8e-65 254.6 605 30.2
CSS0014763 Camellia sinensis var. sinensis HOM05D003356 ORTHO05D004362 2.4e-65 254.2 600 31.0
Thhalv10020171m.g Eutrema salsugineum HOM05D003356 ORTHO05D004362 2.4e-65 254.2 602 30.4
FAN16G2459 Fragaria x ananassa HOM05D003356 ORTHO05D004362 2.4e-65 254.2 602 30.7
Gohir.A01G065000 Gossypium hirsutum HOM05D003356 ORTHO05D004362 2.4e-65 254.2 598 30.9
Ca_20647_v3 Cicer arietinum L. HOM05D003356 ORTHO05D004362 4.1e-65 253.4 608 30.8
Gohir.D01G052400 Gossypium hirsutum HOM05D003356 ORTHO05D004362 4.1e-65 253.4 600 30.8
Gorai.002G072200 Gossypium raimondii HOM05D003356 ORTHO05D004362 4.1e-65 253.4 598 30.9
arahy.Tifrunner.gnm1.ann1.YHI9TY Arachis hypogaea HOM05D003356 ORTHO05D004362 5.3e-65 253.1 627 29.5
MSTRG.6840 Avicennia marina HOM05D003356 ORTHO05D004362 5.3e-65 253.1 596 31.4
EL10Ac4g08143 Beta vulgaris HOM05D003356 ORTHO05D004362 5.3e-65 253.1 606 30.4
MSTRG.15221 Avicennia marina HOM05D003356 ORTHO05D004362 6.9e-65 252.7 595 30.9
A03p39290 Brassica napus HOM05D003356 ORTHO05D004362 6.9e-65 252.7 603 30.2
CAN.G162.68 Capsicum annuum HOM05D003356 ORTHO05D004362 6.9e-65 252.7 605 30.4
ClCG11G018140 Citrullus lanatus HOM05D003356 ORTHO05D004362 6.9e-65 252.7 596 30.0
BraA03t13080Z Brassica rapa HOM05D003356 ORTHO05D004362 9.1e-65 252.3 603 30.2
FAN11G2849 Fragaria x ananassa HOM05D003356 ORTHO05D004362 9.1e-65 252.3 609 30.4
Actinidia35254 Actinidia chinensis HOM05D003356 ORTHO05D004362 1.2e-64 251.9 595 30.8
PGSC0003DMG400012423 Solanum tuberosum HOM05D003356 ORTHO05D004362 1.2e-64 251.9 605 30.1
SGA_v2.0_scaffold34G13734 Striga asiatica HOM05D003356 ORTHO05D004362 1.2e-64 251.9 598 30.8
Oeu005419.1 Olea europaea HOM05D003356 ORTHO05D004362 1.5e-64 251.5 595 31.6
QL08p020494 Quercus lobata HOM05D003356 ORTHO05D004362 1.5e-64 251.5 613 30.5
Haze_09456 Corylus avellana HOM05D003356 ORTHO05D004362 2.0e-64 251.1 596 30.5
Sopen07g031420 Solanum pennellii HOM05D003356 ORTHO05D004362 2.0e-64 251.1 605 30.1
Actinidia01887 Actinidia chinensis HOM05D003356 ORTHO05D004362 4.5e-64 250.0 600 30.5
HanXRQChr15g0494641 Helianthus annuus HOM05D003356 ORTHO05D004362 4.5e-64 250.0 600 30.3
CDE06G0677 Ceratophyllum demersum HOM05D003356 ORTHO05D004362 5.9e-64 249.6 599 28.9
ECA236G2009 Erigeron canadensis HOM05D003356 ORTHO05D004362 5.9e-64 249.6 590 30.8
FAN25G0303 Fragaria x ananassa HOM05D003356 ORTHO05D004362 5.9e-64 249.6 607 30.3
Aqoxy4G00927 Aquilegia oxysepala HOM05D003356 ORTHO05D004362 1.0e-63 248.8 613 31.0
Manes.15G086100 Manihot esculenta HOM05D003356 ORTHO05D004362 1.3e-63 248.4 599 30.4
Sabra11G0105100 Salix brachista HOM05D003356 ORTHO05D004362 1.3e-63 248.4 605 29.6
SalBow2G3561 Salvia bowleyana HOM05D003356 ORTHO05D004362 1.7e-63 248.1 602 31.4
Aqoxy1G02485 Aquilegia oxysepala HOM05D003356 ORTHO05D004362 2.2e-63 247.7 603 30.5
Hma1.2p1_0148F.1_g066130 Hydrangea macrophylla HOM05D003356 ORTHO05D004362 2.2e-63 247.7 595 30.4
Thecc.07G080500 Theobroma cacao HOM05D003356 ORTHO05D004362 2.2e-63 247.7 595 30.1
FAN21G0641 Fragaria x ananassa HOM05D003356 ORTHO05D004362 6.5e-63 246.1 607 29.8
Peaxi162Scf00069g01337 Petunia axillaris HOM05D003356 ORTHO05D004362 6.5e-63 246.1 618 29.8
Rhsim04G0020100 Rhododendron simsii HOM05D003356 ORTHO05D004362 8.5e-63 245.7 599 30.1
Glyma.06G246600 Glycine max HOM05D003356 ORTHO05D004362 1.1e-62 245.4 602 30.9
Hma1.2p1_0881F.1_g232075 Hydrangea macrophylla HOM05D003356 ORTHO05D004362 1.1e-62 245.4 604 29.6
COL.COLO4_09421 Corchorus olitorius HOM05D003356 ORTHO05D004362 1.9e-62 244.6 609 30.4
vmacro11852 Vaccinium macrocarpon HOM05D003356 ORTHO05D004362 1.9e-62 244.6 598 31.3
DCAR_004079 Daucus carota HOM05D003356 ORTHO05D004362 2.5e-62 244.2 606 29.4
Lsat_1_v5_gn_7_105200 Lactuca sativa HOM05D003356 ORTHO05D004362 5.5e-62 243.0 601 29.8
Medtr2g079490 Medicago truncatula HOM05D003356 ORTHO05D004362 5.5e-62 243.0 594 31.0
vmacro09540 Vaccinium macrocarpon HOM05D003356 ORTHO05D004362 5.5e-62 243.0 619 30.4
Aa31LG8G2610 Aethionema arabicum HOM05D003356 ORTHO05D004362 1.2e-61 241.9 611 30.1
Dinv04314 Davidia involucrata HOM05D003356 ORTHO05D004362 1.6e-61 241.5 601 30.3
Phvul.005G082401 Phaseolus vulgaris HOM05D003356 ORTHO05D004362 2.7e-61 240.7 600 30.2
HanXRQChr15g0482461 Helianthus annuus HOM05D003356 ORTHO05D004362 4.6e-61 240.0 593 28.7
Rhsim06G0197100 Rhododendron simsii HOM05D003356 ORTHO05D004362 4.6e-61 240.0 601 30.4
unitig_37.g12574 Utricularia gibba HOM05D003356 ORTHO05D004362 4.6e-61 240.0 599 29.2
MD03G1225500 Malus domestica HOM05D003356 ORTHO05D004362 7.9e-61 239.2 598 30.3
MBI17_g30525_MAGBIO Magnolia biondii HOM05D003356 ORTHO05D004362 1.4e-60 238.4 603 29.5
SGA_v2.0_scaffold73G24287 Striga asiatica HOM05D003356 ORTHO05D004362 1.8e-60 238.0 635 30.2
Cpa.g.sc80.47 Carica papaya HOM05D003356 ORTHO05D004362 3.9e-60 236.9 587 30.3
Lalb_Chr01g0006491 Lupinus albus HOM05D003356 ORTHO05D004362 6.7e-60 236.1 603 30.3
SEGI_21847 Sequoiadendron giganteum HOM05D003356 ORTHO05D004362 2.0e-59 234.6 358 39.9
arahy.Tifrunner.gnm1.ann1.4T1P38 Arachis hypogaea HOM05D003356 ORTHO05D004362 2.6e-59 234.2 628 29.3
CSS0023849 Camellia sinensis var. sinensis HOM05D003356 ORTHO05D004362 3.3e-59 233.8 599 30.6
Ah.06g183980 Amaranthus hybridus HOM05D003356 ORTHO05D004362 4.4e-59 233.4 599 30.6
Lj1A846T66 Lonicera japonica HOM05D003356 ORTHO05D004362 4.4e-59 233.4 653 28.6
arahy.Tifrunner.gnm1.ann1.1CAS5W Arachis hypogaea HOM05D003356 ORTHO05D004362 2.2e-58 231.1 615 29.6
CSS0019237 Camellia sinensis var. sinensis HOM05D003356 ORTHO05D004362 1.4e-57 228.4 581 29.9
Hund22933 Selenicereus undatus HOM05D003356 ORTHO05D004362 1.4e-57 228.4 651 28.6
Ca_01833_v3 Cicer arietinum L. HOM05D003356 ORTHO05D004362 3.1e-57 227.3 590 30.3
Ah.04g165130 Amaranthus hybridus HOM05D003356 ORTHO05D004362 9.1e-57 225.7 599 28.5
Lj3g0006216 Lotus japonicus HOM05D003356 ORTHO05D004362 9.1e-57 225.7 595 30.1
Pp3c13_16790 Physcomitrium patens HOM05D003356 ORTHO05D004362 2.6e-56 224.2 594 28.5
BcaB06g29569 Brassica carinata HOM05D003356 ORTHO05D004362 5.9e-56 223.0 563 30.0
Psat4g135280 Pisum sativum HOM05D003356 ORTHO05D004362 5.0e-55 219.9 552 30.1
Dinv07551 Davidia involucrata HOM05D003356 ORTHO05D004362 8.5e-55 219.2 546 29.9
THA.LOC104818067 Tarenaya hassleriana HOM05D003356 ORTHO05D004362 8.5e-55 219.2 552 30.6
AUR62034265 Chenopodium quinoa HOM05D003356 ORTHO05D004362 7.2e-54 216.1 603 28.7
DCAR_019547 Daucus carota HOM05D003356 ORTHO05D004362 1.2e-53 215.3 611 29.0
Lj8C157T5 Lonicera japonica HOM05D003356 ORTHO05D004362 1.2e-53 215.3 579 29.9
Lsat_1_v5_gn_7_18881 Lactuca sativa HOM05D003356 ORTHO05D004362 2.3e-52 211.1 595 26.6
Actinidia05623 Actinidia chinensis HOM05D003356 ORTHO05D004362 8.8e-52 209.1 546 28.4
BcaC01g03876 Brassica carinata HOM05D003356 ORTHO05D004362 4.1e-49 200.3 602 27.6
Duzib213G0462 Durio zibethinus HOM05D003356 ORTHO05D004362 2.9e-47 194.1 369 33.1
HPP92_028116 Vanilla planifolia HOM05D003356 ORTHO05D004362 1.1e-46 192.2 418 30.4
AUR62029372 Chenopodium quinoa HOM05D003356 ORTHO05D004362 3.2e-46 190.7 597 27.3
TAR626G0399 Trochodendron aralioides HOM05D003356 ORTHO05D004362 1.5e-43 181.8 472 30.1
Cc05_g12210 Coffea canephora HOM05D003356 ORTHO05D004362 2.0e-43 181.4 340 34.1
Lalb_Chr19g0134291 Lupinus albus HOM05D003356 ORTHO05D004362 1.1e-41 175.6 335 32.8
MELO3C016707.2 Cucumis melo HOM05D003356 ORTHO05D004362 7.0e-41 172.9 584 29.6
Lalb_Chr25g0286481 Lupinus albus HOM05D003356 ORTHO05D004362 2.2e-39 167.9 260 38.1
BcaC05g28976 Brassica carinata HOM05D003356 ORTHO05D004362 3.2e-38 164.1 432 28.9
ECA236G3466 Erigeron canadensis HOM05D003356 ORTHO05D004362 3.2e-38 164.1 372 29.0
AagrBONN_evm.TU.Sc2ySwM_228.601 Anthoceros agrestis HOM05D003356 ORTHO05D004362 4.2e-38 163.7 383 30.8
PRCOL_00001912 Prasinoderma coloniale HOM05D003356 ORTHO05D004362 2.2e-34 151.4 544 27.6
Hund02220 Selenicereus undatus HOM05D003356 ORTHO05D004362 5.9e-32 143.3 466 25.8
AL3G27910 Arabidopsis lyrata HOM05D003356 ORTHO05D004362 1.0e-31 142.5 219 37.4
HPP92_020871 Vanilla planifolia HOM05D003356 ORTHO05D004362 9.5e-30 136.0 209 37.3
Dinv08306 Davidia involucrata HOM05D003356 ORTHO05D004362 3.4e-27 127.5 221 36.2
HPP92_014741 Vanilla planifolia HOM05D003356 ORTHO05D004362 2.7e-24 117.9 343 27.4
Actinidia18761 Actinidia chinensis HOM05D003356 ORTHO05D004362 4.7e-21 107.1 248 29.4
AL230U10050 Arabidopsis lyrata HOM05D003356 ORTHO05D004362 6.1e-21 106.7 219 31.5
Dinv08305 Davidia involucrata HOM05D003356 ORTHO05D004362 1.1e-17 95.9 320 26.2
TWI39G1274 Tripterygium wilfordii HOM05D003356 ORTHO05D004362 5.0e-15 87.0 114 42.1
Lalb_Chr19g0134281 Lupinus albus HOM05D003356 ORTHO05D004362 1.9e-14 85.1 266 29.3
TAR626G1858 Trochodendron aralioides HOM05D003356 ORTHO05D004362 5.6e-14 83.6 107 42.1
VMungo1080G1275 Vigna mungo HOM05D003356 ORTHO05D004362 8.0e-13 79.7 210 29.0
Cc05_g12200 Coffea canephora HOM05D003356 ORTHO05D004362 1.1e-12 79.3 264 27.7
Psat7g229040 Pisum sativum HOM05D003356 ORTHO05D004362 5.2e-12 77.0 85 47.1
Lalb_Chr25g0286471 Lupinus albus HOM05D003356 ORTHO05D004362 8.9e-12 76.3 190 27.4
ECA236G4993 Erigeron canadensis HOM05D003356 ORTHO05D004362 1.5e-11 75.5 185 27.6
SEGI_32695 Sequoiadendron giganteum HOM05D003356 ORTHO05D004362 2.0e-11 75.1 145 31.7
Mapoly0029s0041 Marchantia polymorpha HOM05D002512 ORTHO05D002660 3.4e-11 74.3 224 23.7
HPP92_020870 Vanilla planifolia HOM05D003356 ORTHO05D004362 1.9e-09 68.6 146 29.5
arahy.Tifrunner.gnm1.ann1.4J6IUL Arachis hypogaea HOM05D003356 ORTHO05D004362 3.2e-09 67.8 114 37.7
CDE02G2386 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 1.9e-06 58.5 293 22.5
AagrBONN_evm.TU.Sc2ySwM_369.492 Anthoceros agrestis HOM05D002512 ORTHO05D002660 5.6e-06 57.0 243 21.4
CBR_g546 Chara braunii HOM05D005032 ORTHO05D006268 7.3e-06 56.6 225 25.3
SEGI_02117 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 9.5e-06 56.2 345 23.8


User provided reference genes

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