Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.0e-130 469.9 213 100.0
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 4.4e-57 225.3 215 48.8
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.7e-56 223.4 216 46.8
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 3.7e-56 222.2 213 49.8
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 4.8e-56 221.9 215 47.4
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.1e-55 220.7 218 47.2
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 2.4e-55 219.5 221 47.1
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 9.1e-55 217.6 223 46.6
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 1.2e-54 217.2 215 48.8
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 2.0e-54 216.5 223 47.1
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.6e-54 216.1 216 47.2
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 2.6e-54 216.1 216 45.4
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 2.6e-54 216.1 218 48.6
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.6e-54 216.1 219 46.1
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 7.7e-54 214.5 222 45.0
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.0e-53 214.2 219 45.7
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.7e-53 213.4 217 47.0
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.7e-53 213.4 216 45.8
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.7e-53 213.4 209 49.3
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.7e-53 213.4 215 47.0
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.2e-53 213.0 215 47.0
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.2e-53 213.0 220 46.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 3.8e-53 212.2 219 47.0
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 5.0e-53 211.8 215 47.4
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 5.0e-53 211.8 213 46.9
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 5.0e-53 211.8 216 45.8
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 6.5e-53 211.5 216 44.0
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 8.5e-53 211.1 215 44.7
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.1e-52 210.7 216 45.8
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.1e-52 210.7 216 45.8
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.9e-52 209.9 209 47.8
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.9e-52 209.9 217 46.5
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 2.5e-52 209.5 214 45.8
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.5e-52 209.5 222 45.5
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.2e-52 209.1 220 46.8
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 4.2e-52 208.8 218 47.7
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 4.2e-52 208.8 220 45.5
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 5.5e-52 208.4 215 46.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 5.5e-52 208.4 218 45.4
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 9.4e-52 207.6 214 46.3
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 9.4e-52 207.6 215 46.0
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.2e-51 207.2 215 44.7
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.6e-51 206.8 213 47.4
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.7e-51 206.1 260 40.8
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 3.6e-51 205.7 220 45.0
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 4.7e-51 205.3 213 46.0
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 6.1e-51 204.9 219 46.1
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 8.0e-51 204.5 212 44.8
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 8.0e-51 204.5 216 45.4
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 8.0e-51 204.5 213 43.7
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 8.0e-51 204.5 215 47.4
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 8.0e-51 204.5 220 46.8
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.0e-50 204.1 214 46.3
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 2.3e-50 203.0 216 44.9
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 2.3e-50 203.0 215 47.4
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.0e-50 202.2 218 45.4
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 4.0e-50 202.2 221 45.2
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 4.0e-50 202.2 239 42.7
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 4.0e-50 202.2 214 44.9
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 5.2e-50 201.8 223 44.4
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 6.7e-50 201.4 221 44.3
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 8.8e-50 201.1 212 44.8
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 1.1e-49 200.7 218 46.8
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 1.1e-49 200.7 217 44.7
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 1.5e-49 200.3 223 44.4
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.0e-49 199.9 219 44.3
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 2.0e-49 199.9 212 44.3
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.0e-49 199.9 215 43.3
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 3.3e-49 199.1 216 45.4
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 5.7e-49 198.4 219 42.9
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 7.5e-49 198.0 216 44.9
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 7.5e-49 198.0 219 43.4
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 9.7e-49 197.6 229 43.7
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.3e-48 197.2 234 42.3
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 1.7e-48 196.8 220 43.2
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 6.3e-48 194.9 213 42.7
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 8.2e-48 194.5 213 42.7
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 8.2e-48 194.5 206 45.1
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.1e-47 194.1 195 45.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 3.1e-47 192.6 212 44.8
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.1e-47 192.2 189 46.0
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 9.1e-47 191.0 190 48.4
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.2e-46 190.7 258 38.8
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.6e-46 190.3 227 42.3
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 2.7e-46 189.5 204 46.6
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 3.5e-46 189.1 191 46.6
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 5.9e-46 188.3 184 47.8
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.1e-44 184.1 195 48.2
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.5e-44 183.7 199 45.2
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 3.2e-44 182.6 185 45.9
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 4.2e-44 182.2 182 47.8
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 9.4e-44 181.0 195 46.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 2.1e-43 179.9 201 44.8
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 2.7e-43 179.5 182 46.7
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 2.7e-43 179.5 187 46.0
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 4.7e-43 178.7 183 46.4
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.8e-42 176.8 186 43.0
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 4.0e-42 175.6 192 45.8
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 4.0e-42 175.6 182 46.2
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 5.2e-42 175.3 186 47.3
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 6.8e-42 174.9 185 44.9
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 1.7e-40 170.2 183 46.4
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 2.7e-38 162.9 181 42.5
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 4.5e-38 162.2 185 43.2
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 4.5e-38 162.2 185 43.2
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 5.9e-38 161.8 222 39.6
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.5e-36 156.4 194 42.3
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.4e-34 150.6 218 38.1
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.4e-34 150.6 218 38.1
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.3e-32 144.1 214 35.5
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 4.5e-30 135.6 165 41.8
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 6.1e-27 125.2 137 43.8
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 6.1e-27 125.2 125 46.4
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.0e-26 122.9 159 39.6
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.6e-22 110.5 68 58.8
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 3.5e-22 109.4 70 60.0
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.1e-11 73.6 55 52.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 8.3e-08 61.6 62 45.2


User provided reference genes

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